Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq23123 96.9 2e-15 >seq23123 Length=8273 Score = 96.9 bits (106), Expect = 2e-15 Identities = 225/339 (66%), Gaps = 18/339 (5%) Strand=Plus/Plus Query 42322 ACCTATAACACCACATCCTAAACGACCACCTGCGTTACCAGTTATTTTACTAGATTTATT 42381 ||| |||||||||||||| | ||| |||| |||||||||||| |||| || ||| || Sbjct 4326 ACCGATAACACCACATCCAAGACGGGCACCAGCGTTACCAGTTGTTTTGCTCAATTCATG 4385 Query 42382 ATCACCCTTACCGTAATCGTCTTTCATAGTGTGAACCACCAAACTACGACCCAGTATATT 42441 | | || || |||| ||| | || ||||| || || | | || | ||| | Sbjct 4386 ACCCCCAACCCCTAAATCATCTATATCAGCATGAACAACTAATGTTCTTCCAATAATACT 4445 Query 42442 GTATGCCCCGTACAA--------ACTTATCATGT-TGTCTACAATGTCAATACGCGTCGC 42492 | | | || ||| | |||||| | | | | || ||| || | Sbjct 4446 ATGTTCACCACTCAATGAAATTAATTTATCAGATATATTGATTTTGGCAACAC------C 4499 Query 42493 ATTACCACCAACTGAATATATGTTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGG 42552 || | ||||| ||| || || ||||||||||||| |||| ||||||| | || Sbjct 4500 ATCATCACCAGCTGT---TACATTGCCTAAATCACCAACGTGTCTTTCTTCAGCTGTTGG 4556 Query 42553 TCCGCCGTGTTCTTTATGAAAAGGATTAAAATGTTCACCAGCCGATGTACATCCATTGGT 42612 | || || |||| | |||||||||||| | |||||||| ||||| ||||| || Sbjct 4557 GGCACCATGAGTTTTACCATGTGGATTAAAATGTGCTCCAGCCGAGGTACAACCATTTGT 4616 Query 42613 GGTATCTCCAAATTCATGTATATGAAAACCGTGATAACC 42651 | || ||||||||||||| ||||||||| || | ||| Sbjct 4617 ATTGTCACCAAATTCATGTACATGAAAACCATGTTGACC 4655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346474975322261