Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq139863 156 4e-33 >seq139863 Length=2592 Score = 156 bits (172), Expect = 4e-33 Identities = 372/556 (67%), Gaps = 10/556 (2%) Strand=Plus/Plus Query 132877 AAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGT 132936 ||||| || ||||| || || ||||| || ||||| || || || || || ||||| ||| Sbjct 1467 AAATGTTTAAACATTAAACATGCAAAATCACAATGTAATCCTTCATCTCTTGAAATTAGT 1526 Query 132937 TCGTTGCTGAAA--GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGG 132994 || || ||||| || || || ||||| ||||| |||||||| | ||||||||| | | Sbjct 1527 TCATT--TGAAAATGTTAATCCTGGCATAAGGCCACGTTTTTTTAACCAAAATATTGATG 1584 Query 132995 CGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGA 133054 | ||||| || |||||| | || || || || || ||||| | | || || || Sbjct 1585 CAAAACTACCACTAAAGAATATTCCTTCAACTGCTGCAAAAGCAATAATACGTTCTCCAT 1644 Query 133055 ACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACG 133114 | | ||| ||| || | ||||| | ||||| || || |||| ||| || || | Sbjct 1645 AATTAGCTGATTTACTTGTTATCCAATCTAATGCCCAATCAGCTTTTTTTTTAACACATG 1704 Query 133115 GCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGT 133172 | | ||||| || || || || || | | | ||| | ||| | | || || Sbjct 1705 GTAATGTTTCAATTGCATTAAA--AAGGAAATCTCTTTCTTTTGGATCCTTTATATATGT 1762 Query 133173 GTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTA 133232 || || | | |||||||| || || || || ||||| || |||||||| || || Sbjct 1763 ATCAATTAAAATGCTGTACATTTCGGAATGAACATTTTCCATAGCTATTTGAAATCCATA 1822 Query 133233 AAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTT 133292 ||| || ||||| || || || ||||||||| ||||| || || ||||||||||| Sbjct 1823 AAAACAACGCGCTTCAGTTACTTGAACTTCTTGACTAAAACGTTCAACAAGATTTTCGTT 1882 Query 133293 GACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTC-GT 133351 || || || || || || ||||| || | || || |||||||| || || Sbjct 1883 AACTATACCATCTGAAGCAGCAAAAAATGCTAAAACATGTGATATGAAATGACGTTCTCC 1942 Query 133352 TGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCC 133411 | ||| || | |||||| | | ||||| || | || || ||||| || |||| Sbjct 1943 AGAAGTT-AATTTGTTCCAGTCCGTCATATCCTTTGATAAATCAACTTCCTCAACCGTCC 2001 Query 133412 AAAACGACGCCTCGGC 133427 |||| || || || || Sbjct 2002 AAAAAGATGCTTCAGC 2017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498851612305280