Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq210017 105 8e-18 seq210675 86.0 7e-12 >seq210017 Length=1697 Score = 105 bits (116), Expect = 8e-18 Identities = 462/721 (64%), Gaps = 35/721 (5%) Strand=Plus/Plus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 ||| || || | ||||| |||||||| ||||||| |||||||| ||||||||||| || Sbjct 426 ATATATATTTGATGTGTATGGTTCAAATGATTCATTGTTACCCAAAATTTGTGCGGTTGA 485 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTT-----CCTTGATG 106048 ||||||||||||||||| || || | || |||| ||| | || || || Sbjct 486 TGCTGTTGGCATTGGTGCAATTAATAACGAATTTCGAACACCATGTTGAGCAATTTTATC 545 Query 106049 CGTTCCTTGAGAAC-ATCCCAGTCGTAGTTGAGCTTGG-TTTCACCTTCCCACATATCAA 106106 | || || ||| | |||||| || | | | || ||| | | |||||| ||| Sbjct 546 CTTTAATTCAGACCAATCCCA----TAAATTTGTTGGGATTTTA---TTCCACATGTCAT 598 Query 106107 ATTG--AAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGC 106164 |||| || |||| | || ||||| || ||| |||| ||||| | ||| | Sbjct 599 ATTGTAAAATACCCTTACTTACAGGGGAG--CCTTCATATGTTTCATAAGGACCCAATTC 656 Query 106165 TTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGC 106224 || ||| |||||||| || || || | || | | || || |||||||| || | Sbjct 657 TTGAGCTAATTCACAACTAGCTTCTAAGGCGCCATAGTAAATAGTTTCAAAAATTTGTTG 716 Query 106225 ATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGC 106284 |||| || ||||| | ||| | | | || | ||||| |||| || Sbjct 717 GTTCAATAATTTAGCTTCTTTGCTTTCATAAGGAAAACGCATTAGTATAAAAGCATCAGC 776 Query 106285 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 106344 || || || || || | ||||| ||||| || || | ||| || ||| || Sbjct 777 AAGTCCCTGTACCCCAATTCCAATTGGTCTATGCCGTAAATTTGATTTTTTAGCTTCGGG 836 Query 106345 AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 106404 || |||||| ||||| || || | | |||| |||||| || | ||| |||| | Sbjct 837 GACAGGATAATAATTTACATCTATAATTTTATTTAAATTTTTCGTTATAATTTTTGAAA- 895 Query 106405 TTCATG----AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAA 106460 |||| || || || | | ||||| || | || | | || || | || Sbjct 896 --CATGTTTTAATTTATTGA-AGTCAAAGGT---TTTATCCTGAGAAACGAACATATTAA 949 Query 106461 GGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTT 106520 | || || || |||||||| || ||||| | ||||| | ||||| | ||||| Sbjct 950 GAGCTATAGACGCCAAATTACATACAGCAATTTCATCTGGCGAAGAATACTCCACAATTT 1009 Query 106521 CTGTACACAAGT---TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGT 106577 | || || || | || ||| ||| || |||| ||| | || || || ||| | | Sbjct 1010 CAGTGCATAAATTACTGCAAC---GAATTGTTCCCACATTTTGCTGATTGCTTTTTCTAT 1066 Query 106578 TGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTG 106637 | || ||||| ||||| |||||||| || || || ||||| |||||||| | ||||| Sbjct 1067 TACAAGCATCTTTGTATAGCATGTAAGGTGTTCCTGTCTCAACCTGTGACTCAATAATTG 1126 Query 106638 C 106638 | Sbjct 1127 C 1127 >seq210675 Length=2205 Score = 86.0 bits (94), Expect = 7e-12 Identities = 232/351 (66%), Gaps = 8/351 (2%) Strand=Plus/Plus Query 168301 TACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTAAAAGTCTGGTTCAA 168360 |||| || | ||||| ||||||||||||||||| |||| || || | ||||| | Sbjct 477 TACCATCTGCACCATTGACGAGAACCATTGGTATAATTGGAATATACCATGTAGGTTCTA 536 Query 168361 TTGAGCGCCCATCATCATCCAAGT---AGTTGAGGATCGGGTCATCCCGAGGATCAAAGA 168417 || | || ||||||||| | | || | | || ||||| | |||| || | Sbjct 537 TTTTTTG---ATTATCATCCAATTCATAATTCAAAAGTGGATCATCATGTGGATGGAAAA 593 Query 168418 TCTTGCGAGCCTCTTTGGTAAGTTTTGTGAAAATGTACCTCGTCTGAGAAGCATCCTTAC 168477 || | || | | | | |||| || ||||| | || || | ||| || | Sbjct 594 TCAATCTAGTTAGTGGCGACATTATTGTAAATATGTAACGCGGACTAGCTGAATCTTTTC 653 Query 168478 CACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATGTTGTTTGAAC 168537 | || | | ||||||||||||||||| | ||||| || | ||||| |||||||||| Sbjct 654 CTCCAGTTAATCGCGTACCAAATTGACCTCTGGGTTCTAGTAAATTAATATTGTTTGAAC 713 Query 168538 CCGTGTAGTCGTTTGCCAACTTAACAATCG-TGTCCGCTAAGGATACTTCACCATGGTGG 168596 | | | | | |||||| |||||||| | || | | | ||| ||| || ||||| Sbjct 714 CAATAAAATTCTGTGCCAAATTAACAATTGTTGAACAC-AGTGATGTTTCGCCGTGGTGA 772 Query 168597 TACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTTCA 168647 || || ||| | ||||| || || | |||| |||||| || || | |||| Sbjct 773 TAAGCTGACATTTCCGCAACTGATCCGGCCAATTGTGCAACTTTTACTTCA 823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588422387841080