Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_015252.1 Length=36953 Score E Sequences producing significant alignments: (Bits) Value seq111081 107 5e-19 >seq111081 Length=2465 Score = 107 bits (118), Expect = 5e-19 Identities = 155/214 (72%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 32109 CAGCAGTTGCCACATTTACACTAGCTGTAAATCGTACGTTTACGAATCAGCAA--GGTGA 32166 ||||||| || || ||||| ||||| |||| |||| ||||||||| |||| || | Sbjct 2216 CAGCAGTGGCAACCTTTACCCTAGCGTTAAACCGTAACTTTACGAAT--GCAAATGGAAA 2273 Query 32167 GCGTGAAGCTGATTACATTAACTGTGTCGTTTGGCGTAAGGCTGCCGAAAGCGTAGCTAA 32226 |||||||| |||| ||||||||||| |||||||||| |||| |||| | ||||| Sbjct 2274 TCGTGAAGCAGATTTTATTAACTGTGTGATTTGGCGTAAACCTGCTGAAACAATGGCTAA 2333 Query 32227 CTACTTGAAAAAAGGAAGTTTAGCAGGTGTTGATGGTCGATTACAAACACGTAACTATGA 32286 || || ||||| | || |||||| |||||| | ||||| | |||||||| Sbjct 2334 TTATGCCAAGAAAGGCACATTGCTAGGTGTAACTGGTCGTATCCAAACGAGAAACTATGA 2393 Query 32287 -AGGCAATGACGGTAAGCGTGTATATGTGACAGA 32319 | ||| | ||| | ||||| |||||||| || Sbjct 2394 GAATCAA-CAAGGTCAACGTGTTTATGTGACTGA 2426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117831570851910