Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_015254.1 Length=41518 Score E Sequences producing significant alignments: (Bits) Value seq205685 98.7 3e-16 >seq205685 Length=35797 Score = 98.7 bits (108), Expect = 3e-16 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 27587 TCTGTCGTCGTATTTTTCATTTAAAGATTTCAACAGAACAA---TGTTATCGTCATAGTT 27643 ||| || || || |||||||| | |||||| | | || |||| |||| || || Sbjct 32321 TCTATCCTCATAATTTTCATTGATAGATTTTAGAATGACTTGTCTGTTGTCGTAATCTTT 32262 Query 27644 GAAATATACTTTCTTACAAGTAACACCATTACCATCAATATCTACAATAGCAATCTCACC 27703 ||| ||||||||||| || || || | || |||| || | |||||||| || || Sbjct 32261 --AATG-ACTTTCTTACATGTCACGCCGTCTCCGTCAACCTCAATTATAGCAATTTCCCC 32205 Query 27704 ATTTTCAACTTCTGGTTGCTGTTTATAGAAAACAATTGATCCGTCATGTAGCAAAGGCTC 27763 |||||| || ||| |||||| || |||||||| || ||| || | || ||| ||||| Sbjct 32204 ATTTTCCACATCTTGTTGCTTCTTGTAGAAAACTATACTTCCATCTTTTATCAACGGCTC 32145 Query 27764 CATTGAATCTCCCTGAATAACTAACGCGCAATCAGC 27799 ||| || ||||| || | ||| |||||||| || Sbjct 32144 CATAGAGTCTCCTTGCACGTTTAAAGCGCAATCTGC 32109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132402913691920