Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq29459 141 1e-28 >seq29459 Length=7851 Score = 141 bits (156), Expect = 1e-28 Identities = 454/698 (65%), Gaps = 20/698 (3%) Strand=Plus/Plus Query 154418 TAAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGCAGTTGCACAATGAAATTAAA 154477 ||||||| | || ||||| || ||| ||||| | || ||| || |||||| |||| Sbjct 1461 TAAAGATATTTCTTTAGTCCATTCAATGATTCCATTGGGATCTTGTACTATGAAACTAAA 1520 Query 154478 TGCAGCAGCAGAACTAATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATAC 154537 | | || ||||| | ||||| || | || | || | | | |||||| | Sbjct 1521 TTCTACAACAGAAATGATGCCATGCTCGTTCCAACATTTCACAGAAATTCATCCATTTGT 1580 Query 154538 ACCTATGATACAGACCATGGGTTATCAGAAAATTATAGATGACTTACAGAAATGGTTATG 154597 |||| | || | | |||||||| || | | | || || | ||| ||||| Sbjct 1581 ACCTGTTGACCAAGCAAAAGGTTATCATCAACTATTTCAGGAATTGGAAAAAGATTTATG 1640 Query 154598 TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTA 154657 ||| || ||||| | ||| |||||||| ||||| || ||| | || ||||| || Sbjct 1641 TGAGATTACAGGATACGATAAAATATCATTTCAACCAAATAGTGGAGCTCAAGGTGAATA 1700 Query 154658 TGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGT 154717 || || | ||| || | |||| ||| || | || || | | | || |||| Sbjct 1701 CGCTGGTTTAAGAGCTATTCGTTCATATCATGAAAGTCGTGGTGAAGGTCATCGACATGT 1760 Query 154718 ATGTTTGATACCAGAGTCAGCAC--ATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGG 154775 |||||||| |||| ||||| | |||| || ||||| ||| || ||||| || Sbjct 1761 TTGTTTGATTCCAG--TCAGCGCTCATGGCACAAATCCAGCTTCAGCACAAATGGCTGGA 1818 Query 154776 ATGAAAGTTGTAGGTGTCAAGTGTGATGA----TGATGGTAACATAGACATCAAAGATCT 154831 ||| ||| | | ||| | || | |||||||| ||| || | | | || Sbjct 1819 ATGTCAGTGGAAC----CAATTCGTATTAAATCTGATGGTAGCATTGATTTAGAGCACCT 1874 Query 154832 AGAGAAGAAAGCAATCATGAATACATTTGAAC----TGTCATGTATTATGATTACATACC 154887 || |||||| | |||| || ||| | || ||| | ||| |||| || | Sbjct 1875 -GA-AAGAAAAGGCCGAAGAATT--TTCTAACACTCTATCTTGTTTAATGGTTACCTATC 1930 Query 154888 CATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACA 154947 | || ||| || || || ||| ||| ||| | | || ||||| | |||||| | Sbjct 1931 CGTCAACAATGGGAGTTTTCGAAGATAATATTCGCGACATTTGTAATTTAGTTCATAAAC 1990 Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007 |||||||||| || ||| | ||||| || || | |||||||| || || || || Sbjct 1991 ATGGTGGTCAAGTTTATTTAGATGGTGCTAACATGAATGCACAAGTTGGTCTTTGTCGAC 2050 Query 155008 CATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCAC 155067 || |||| ||||| || || | |||| |||| | ||||||||||||||||| |||| Sbjct 2051 CAGGTGACTATGGAAGCGACGTGTCTCATTTAAATCTTCATAAAACATTCTGTATACCAC 2110 Query 155068 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTA 155105 |||||||||| || || || | ||||||||||||||| Sbjct 2111 ATGGAGGTGGTGGACCAGGTATGGGTCCTATAGGTGTA 2148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577682831109280