Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq29459 161 1e-34 >seq29459 Length=7851 Score = 161 bits (178), Expect = 1e-34 Identities = 458/697 (66%), Gaps = 20/697 (3%) Strand=Plus/Plus Query 159094 AAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAAC 159153 |||||| | || ||||| || ||| ||||| | || |||||||||||||||||| Sbjct 1462 AAAGATATTTCTTTAGTCCATTCAATGATTCCATTGGGATCTTGTACTATGAAACTAAAT 1521 Query 159154 GCAGCATCAGAACTGATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACA 159213 | || ||||| ||||||| || | || | || | | | |||||| | | Sbjct 1522 TCTACAACAGAAATGATGCCATGCTCGTTCCAACATTTCACAGAAATTCATCCATTTGTA 1581 Query 159214 CCTATGATACAGACCATGGGTTATCAAAAAATTATAGATGACTTACAGAAATGGTTATGT 159273 ||| | || | | |||||||| || | | | || || | ||| |||||| Sbjct 1582 CCTGTTGACCAAGCAAAAGGTTATCATCAACTATTTCAGGAATTGGAAAAAGATTTATGT 1641 Query 159274 GATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTAT 159333 || || ||||| | ||| |||||||| ||||| || ||| | || ||||| || Sbjct 1642 GAGATTACAGGATACGATAAAATATCATTTCAACCAAATAGTGGAGCTCAAGGTGAATAC 1701 Query 159334 GCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTA 159393 || || | ||| || | |||| ||| || | || || | | | || |||| Sbjct 1702 GCTGGTTTAAGAGCTATTCGTTCATATCATGAAAGTCGTGGTGAAGGTCATCGACATGTT 1761 Query 159394 TGTTTGATACCAGAGTCAGCAC--ATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGA 159451 |||||||| |||| ||||| | |||| || ||||| || |||||| ||||| || | Sbjct 1762 TGTTTGATTCCAG--TCAGCGCTCATGGCACAAATCCAGCTTCAGCACAAATGGCTGGAA 1819 Query 159452 TGAAAGTTGTAGGTGTCAAGTGTGATGA----TGATGGCAACATAGACATCAAAGATCTA 159507 || ||| | | ||| | || | |||||| | ||| || | | | || Sbjct 1820 TGTCAGTGGAAC----CAATTCGTATTAAATCTGATGGTAGCATTGATTTAGAGCACCT- 1874 Query 159508 GAGAAGAAAGCAATCATGAATACATTTGAAC----TGTCATGTATTATGATTACATATCC 159563 || |||||| | |||| || ||| | || ||| | ||| |||| ||||| Sbjct 1875 GA-AAGAAAAGGCCGAAGAATT--TTCTAACACTCTATCTTGTTTAATGGTTACCTATCC 1931 Query 159564 ATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAA 159623 || ||| || || || ||| || || | | || ||||| | |||||| | | Sbjct 1932 GTCAACAATGGGAGTTTTCGAAGATAATATTCGCGACATTTGTAATTTAGTTCATAAACA 1991 Query 159624 TGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACC 159683 ||||||||| || ||| | |||||||| || | |||||||| || ||||| ||| Sbjct 1992 TGGTGGTCAAGTTTATTTAGATGGTGCTAACATGAATGCACAAGTTGGTCTTTGTCGACC 2051 Query 159684 ATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACA 159743 | |||||||||| || || | |||| |||| | ||||| ||||||||||| ||||| Sbjct 2052 AGGTGACTATGGAAGCGACGTGTCTCATTTAAATCTTCATAAAACATTCTGTATACCACA 2111 Query 159744 TGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTA 159780 ||||||||| || || || | |||||||| |||||| Sbjct 2112 TGGAGGTGGTGGACCAGGTATGGGTCCTATAGGTGTA 2148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 586497884807120