Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq109337 95.1 3e-15 >seq109337 Length=3741 Score = 95.1 bits (104), Expect = 3e-15 Identities = 131/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 965 TGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGATTGATGT 1024 ||||| ||||| |||| ||||| || || || ||||||| ||| | | |||||||| Sbjct 462 TGGATCGTATGGGCGAATTGCTCCAAGATCAGGCTTAGCGGTTAAAAATTTTATTGATGT 521 Query 1025 GGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTATTTAATTT 1084 |||||||| || | ||| ||| | | | || || || || || ||||||| ||| Sbjct 522 TGGTGCTGGAGTGGTAGATGAAGATTATCGTGGAAATGTAGGGGTGCTTTTATTCAATCA 581 Query 1085 TAGCGATAAGCGTTTTCATATTTCAAGA-GGTGATAGGATTGCTCAGTTAATTTGTGAAA 1143 | || ||| | ||||| || || | ||||| || |||||||| ||||||||||||| Sbjct 582 TTCTGAAAAG-GACTTCATGGTTAAAAAAGGTGACAGAATTGCTCAATTAATTTGTGAAA 640 Query 1144 A 1144 | Sbjct 641 A 641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138333593866452