Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq109337 114 1e-20 seq69589 96.9 3e-15 >seq109337 Length=3741 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 9067 GGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCTTATTCACGACAAAG 9126 |||||| | | || ||||||||||||||||||||| ||||| || || || || | ||| Sbjct 653 GGATAATACACTTTTTCACAAATTAATTGAGCAATTCTGTCACCTTTTTTAACCATGAAG 594 Query 9127 TCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCATCGATC 9186 || | || ||||||||||| | | ||| || || || || | ||||| ||||| | | Sbjct 593 TCCTTTTCAGAATGATTGAATAAAAGCACCCCTACATTTCCACGATAATCTTCATCTACC 534 Query 9187 ACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAGTCCAGAGCGGGGCGCGATTCGA 9246 || |||||||| || || || || | || ||||||| || || | || || ||||| Sbjct 533 ACTCCAGCACCAACATCAATAAAATTTTTAACCGCTAAGCCTGATCTTGGAGCAATTCGC 474 Query 9247 CCGTAGCATCC 9257 || || |||| Sbjct 473 CCATACGATCC 463 >seq69589 Length=1421 Score = 96.9 bits (106), Expect = 3e-15 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 9122 CAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCAT 9181 |||| |||| || |||||||| || | ||| ||||| | ||| ||||| |||||||||| Sbjct 821 CAAAATCTGCATCAGAATGATTAAATAACACAACTCCTAAGTTGCCCCTATAATCCTCAT 762 Query 9182 CGATCACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAGTCCAGAGCGGGGCGCGA 9241 | | || |||||||| ||||| || || | || ||||| ||||| || ||||| || | Sbjct 761 CAACAACTCCAGCACCAACGTCAATAAAATTTTTAACCGCCAGTCCTGAACGGGGAGCTA 702 Query 9242 TTCGACCGTAGCATCCCACCGGTAATTGCACCCGCAAGTCGGT 9284 | || || |||| |||| ||| || ||||||| || Sbjct 701 CCCTGCCATATGATCCAGTTGGTACTTGAACTTGCAAGTCAGT 659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379956523424391