Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq211115 125 2e-23 >seq211115 Length=3236 Score = 125 bits (138), Expect = 2e-23 Identities = 230/334 (69%), Gaps = 5/334 (1%) Strand=Plus/Plus Query 38245 TAAAAAATGATCCATATGGACGTCGACATATTCTAAGTGCATGGAATGTTGGTGAGCTTG 38304 ||||||| |||||||| |||||| |||||| | ||||| || ||| | || ||| Sbjct 550 TAAAAAAGAATCCATATTCACGTCGTCATATTATTAGTGCTTGAAATCCAGCAGAAGTTG 609 Query 38305 ATGATATGGCTCTTCAACCATGTCATAGTTTTGTTCAATGGGTAGTT---AGTGATAATA 38361 |||| |||||| | | ||||||||||| ||| |||| | ||| | ||||||| Sbjct 610 ATGAGATGGCTTTACCACCATGTCATACTTTAATTCAGTTTTATGTTTCAAAAGATAATA 669 Query 38362 AACTAAGTTGT-ATTCTTACCCAACGCTCAGCAGATACATTCTTGGGAGTTCCACTGAAT 38420 || |||||||| | | || ||||| || ||| || || ||||| || | ||| Sbjct 670 AATTAAGTTGTCAATTATA-TCAACGTAGTGCGGATGTTTTTTTAGGAGTCCCTTTTAAT 728 Query 38421 ATCACATCATATTCAGTACTCACTCATATGATAGCACAAATTACTGGATTAGAAGTTGGT 38480 ||| || ||| | || | || ||| | || || ||| || ||| ||| | ||||| Sbjct 729 ATCGCAAGTTATGCTTTATTAACCCATTTAATTGCCCAAGTTGTTGGTTTAAATGTTGGC 788 Query 38481 GAATTTATCTGGAACGGTGGAGATTGTCATATTTACTTGAATCATATCGAACAAGTAAAA 38540 || ||| || | ||||||||||||||||| |||||| | | ||| | ||| Sbjct 789 GATTTTGTCCATACTTTAGGAGATTGTCATATTTATAAAAATCATTTTAATCAAATTAAA 848 Query 38541 GAACAATTATCACGAGATACAAAAGAATTACCAA 38574 ||||||||| |||| | | || ||||||||| Sbjct 849 GAACAATTAACACGTTCTCCGCAAAAATTACCAA 882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1103461867085304