Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_019915.1 Length=40917 Score E Sequences producing significant alignments: (Bits) Value seq205685 230 6e-56 >seq205685 Length=35797 Score = 230 bits (254), Expect = 6e-56 Identities = 207/259 (80%), Gaps = 7/259 (3%) Strand=Plus/Minus Query 39478 ATGTACTAAAAACATAAATTGCTTTGAAGAACCTTAGAGCCTTAATACCACAATAAAGCT 39537 |||||||||||||||||||||||||||| ||||||||||||| | |||||||| | Sbjct 882 ATGTACTAAAAACATAAATTGCTTTGAAAAACCTTAGAGCCTATAAGCCACAATAGCGGA 823 Query 39538 GAAAAGACTTTTTGACGGTTTAACAATTTTAAGGATTGGTTTGTTTAGCAGCACTACCCC 39597 |||| || | ||| || ||||||| || |||||||||| |||||||||||||||||| Sbjct 822 GAAATTACGCTATGAAGGATTAACAAGTTATAGGATTGGTTAGTTTAGCAGCACTACCCC 763 Query 39598 TAAGTGGAGACATATGGGGAATGTTCAACGACTAGAGGATTGCGTCCTCGTAGGTTTCAA 39657 || | |||||||||||||||||||||||||||||| |||||||||| || || Sbjct 762 TACCCTTTAAAGCATGGGGAATGTTCAACGACTAGAGGATTGCCTCCTCGTAGGGTTTAA 703 Query 39658 GTGAAATCGAAAGAAGAACTATCTCA--CGTAGAT-----AGAGACATATAGTCTGGTCA 39710 | || |||||||||||||| || | | | ||| ||| | | ||||||||| || Sbjct 702 GCAAACTCGAAAGAAGAACTGCCTAAGTCTTTGATATGGCAGAAAGAAATAGTCTGGACA 643 Query 39711 CGTCTTGTAATGAGAGTGC 39729 ||||||||||||||||||| Sbjct 642 CGTCTTGTAATGAGAGTGC 624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130484539749566