Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_020197.1 Length=45606 Score E Sequences producing significant alignments: (Bits) Value seq111081 138 3e-28 seq205685 125 2e-24 >seq111081 Length=2465 Score = 138 bits (152), Expect = 3e-28 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 8360 AACCGTCATTTCAAAAATGATAACGGAGAGCGTGAAACTGACTTTATCAATTGCGTTATC 8419 |||||| | || | |||| || ||| | |||||| | || ||||| || || || || Sbjct 2245 AACCGTAACTTTACGAATGCAAATGGAAATCGTGAAGCAGATTTTATTAACTGTGTGATT 2304 Query 8420 TGGAGACAGCAAGCTGAAAACTTGGCTAACTGGGCTAAAAAAGGTGCATTGATTGGCATT 8479 ||| | | | ||||||| ||||||| | || || ||||| ||||| | || | Sbjct 2305 TGGCGTAAACCTGCTGAAACAATGGCTAATTATGCCAAGAAAGGCACATTGCTAGGTGTA 2364 Query 8480 ACTGGACGTATTCAGACTCGTAGCTATGAAAATCAGCAAGGTCAACGTGTTTACGTGACT 8539 ||||| ||||| || || | | |||||| ||||| ||||||||||||||||| |||||| Sbjct 2365 ACTGGTCGTATCCAAACGAGAAACTATGAGAATCAACAAGGTCAACGTGTTTATGTGACT 2424 Query 8540 GAAGTTGTCGCTGAAAACTTCCAGATGTTGGAAAGTCGTGC 8580 ||| ||||| || || ||||| |||| ||||||||||| Sbjct 2425 GAAATTGTCTGCGATAATTTCCAACTGTTAGAAAGTCGTGC 2465 >seq205685 Length=35797 Score = 125 bits (138), Expect = 2e-24 Identities = 372/561 (66%), Gaps = 16/561 (3%) Strand=Plus/Minus Query 14738 GCTTCATGGAGCTAAACGAGCAGGTAAGACCGTTGTTAACAATGATACATTTGTAACCGA 14797 ||| |||||||| || || ||||||| || | || ||||| |||| | ||| Sbjct 21450 GCTGCATGGAGCGAAGCGGTCAGGTAAAACGAAAATAAATAATGACTTATTTCTGTTCGA 21391 Query 14798 ATTAAGTCGTGTCAGAAAAATTGCTGAC--CGATTAGGTGTAGATGAGCCTATTTACATT 14855 ||| | ||||| |||||||| || || ||| ||| ||| | ||||| || ||||| Sbjct 21390 GTTACGACGTGTTAGAAAAATAGCCGATGACGA--AGGCGTAAAAGAGCCGATGTACATA 21333 Query 14856 TTGGCAGGTACGTCTTCAA--CAGCAATTCAGAATAACGTCTTACAAGAACTTTATAACA 14913 || || ||| || | || | | ||||| || ||| | || ||||| || ||||| | Sbjct 21332 TTAGCTGGT--GTTTCCAGTTCGACGATTCAAAAGAACATATTGCAAGAGCTATATAATA 21275 Query 14914 AGTATGGCTTTGAACCAAAATACGATAAACATGGCTCTTTCGTTTTCTGTGGTGTCAAAG 14973 ||| | | ||||| || || || ||||| || ||| || | ||| || || | Sbjct 21274 TGTACAACATCGAACCTAAGTATGACAAACACGGAAATTTTAAGTTGTTTGGCGTGAAGG 21215 Query 14974 TCGTGCAGGTCTATACTGGCTCTATATCTGGTCTTAAACGTGCCCGTGGTTTTACAGCGT 15033 | || || | |||||| || ||| || || | | | ||| | ||||| | Sbjct 21214 TGGTACAAGCCTATACGGGAAATATTGGAGGCGTTGGAGCTATTAGAGGTATGACAGCTT 21155 Query 15034 TCGGAGCTTATGTCAACGAAGCGTCGCTAGCCAAT-GAGTTTGTTTTTAAAGAGATTATC 15092 |||| |||||||| |||||||||||||||||||| ||| || ||| ||| ||| | Sbjct 21154 TCGGTGCTTATGTAAACGAAGCGTCGCTAGCCAAGCGAGAA-GTGTTTGCAGAAATTGTA 21096 Query 15093 TCACGCTGTTCTGGTGATGGTGCTCGTGTTGTTTGG-GATAGTAACCCAGATAATCCTAA 15151 || || |||||||| |||||| | | | || || |||| ||||||||||| || | Sbjct 21095 TCGCGTTGTTCTGGAACTGGTGCAAG-GATATTAGGCGATACAAACCCAGATAACCCAGA 21037 Query 15152 TCACTGGCTTAACCGAGATTATATCGGTAAGAACGACGGAAAGATTATAGAT--TTTAGT 15209 || ||| | || || || || | ||| ||| | ||| || || || ||| | Sbjct 21036 ACATTGGTTAAAAAAGGAATACATTGATAA-TCCGA-GTAAAAATATTAAATCGTTTCAT 20979 Query 15210 TTCAAGCTAGATGATAATACTTTCTTATCGAAACGCTATATCGATTCTATCAAGGCAGCT 15269 || | |||||||||| || || || | |||| ||| || || || | |||| Sbjct 20978 TTTGAATTAGATGATAACACATTTTTGGCTGAACGTTATCGAGAAAACATAAAAGAAGCT 20919 Query 15270 ACGCCAAAGGGTAAGTTCTAC 15290 || |||| || | ||| ||| Sbjct 20918 ACCCCAAGCGGGATGTTTTAC 20898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145451686863872