Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq29459 156 5e-33 >seq29459 Length=7851 Score = 156 bits (172), Expect = 5e-33 Identities = 456/696 (66%), Gaps = 16/696 (2%) Strand=Plus/Minus Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241 |||||| |||||||| | || || || |||||||||||||| ||||||||||| ||||| Sbjct 2148 TACACCTATAGGACCCATACCTGGTCCACCACCTCCATGTGGTATACAGAATGTTTTATG 2089 Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301 | ||||| |||| | || || |||||||||| |||| ||||| || ||||| Sbjct 2088 AAGATTTAAATGAGACACGTCGCTTCCATAGTCACCTGGTCGACAAAGACCAACTTGTGC 2029 Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATAT 138361 ||| | || |||||||| | ||| || |||||||||| | |||||| | ||||| || Sbjct 2028 ATTCATGTTAGCACCATCTAAATAAACTTGACCACCATGTTTATGAACTAAATTACAAAT 1969 Query 138362 CTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATG- 138420 | | || || ||| || || || || || ||||| |||| ||| | ||| | Sbjct 1968 GTCGCGAATATTATCTTCGAAAACTCCCATTGTTGACGGATAGGTAACCATTAAACAAGA 1909 Query 138421 -AGAGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA 138479 ||||| | |||| | |||||| || || | | | || ||| | ||| Sbjct 1908 TAGAGTGTTAGAAAATTCTTCGGCCTTTTCTT-TC-AGGTGCTCTAAATCAATGCTACCA 1851 Query 138480 TCA----TCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGG 138535 ||| | || | ||| | | ||| |||||| ||||| ||| ||| || Sbjct 1850 TCAGATTTAATACGAATTG----GTTCCACTGACATTCCAGCCATTTGTGCTGAAGCTGG 1795 Query 138536 ATTAGTTCCAT--GTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGAT 138593 ||| || |||| | ||||| |||| |||| ||| |||| || | | | || || Sbjct 1794 ATTTGTGCCATGAGCGCTGA--CTGGAATCAAACAAACATGTCGATGACCTTCACCACGA 1737 Query 138594 CCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTA 138653 | || |||||||| | || ||| | || || || ||||| || | ||| || Sbjct 1736 CTTTCATGATATGAACGAATAGCTCTTAAACCAGCGTATTCACCTTGAGCTCCACTATTT 1677 Query 138654 GGTTGTAATGATATAGAATCAAAACCTGTGATATCACATAACCATTTCTGTAAGTCATCT 138713 ||||| |||||||| ||| | ||||| || |||||||| ||| | || || | Sbjct 1676 GGTTGAAATGATATTTTATCGTATCCTGTAATCTCACATAAATCTTTTTCCAATTCCTGA 1617 Query 138714 ATTATCTTTTGATAACCCATGGTCTGTATCATAGGTGTATGTGGATGCACGTTGGCAAAT 138773 | || | |||||||| | | || | |||| | |||||| | | | || Sbjct 1616 AATAGTTGATGATAACCTTTTGCTTGGTCAACAGGTACAAATGGATGAATTTCTGTGAAA 1557 Query 138774 TCTTCCCATGACACAGGCATCAGTTCTGCTGCTGCATTTAGTTTCATTGTGCAACTACCA 138833 | || | || ||||||| ||||| || | |||||||||||| || ||| || Sbjct 1556 TGTTGGAACGAGCATGGCATCATTTCTGTTGTAGAATTTAGTTTCATAGTACAAGATCCC 1497 Query 138834 AGTGGAACCATACCATTTACTAATGAGAAATCTTTA 138869 | ||||| ||| || ||||| || | ||||||| Sbjct 1496 AATGGAATCATTGAATGGACTAAAGAAATATCTTTA 1461 Score = 120 bits (132), Expect = 4e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 139238 AATTCTTCTTGCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGA 139297 |||| || | |||||| | | || ||||| | |||||||| |||||| | | | || Sbjct 995 AATTTTTTTAGCTATATCTTTAAGACCATCCGGTCCATGATAAATTGCATACATTGCTGA 936 Query 139298 CATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAAT 139357 ||||||||| | || ||||| ||||| || || ||||| || ||||| || | |||||| Sbjct 935 CATATTTGCTAAAAGAGCTTGAGCTGTACATATATTACTTGTAGCTTTATCACGTCTAAT 876 Query 139358 ATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGC 139393 ||| || ||||| ||||||| ||||||||| ||||| Sbjct 875 ATGTTGTTCTCTTGTTTGTAATGCTAATCTATATGC 840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577468997438840