Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq210017 156 5e-33 seq210675 84.2 3e-11 >seq210017 Length=1697 Score = 156 bits (172), Expect = 5e-33 Identities = 591/916 (65%), Gaps = 31/916 (3%) Strand=Plus/Minus Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 |||||||| |||| | ||||||| ||||| | || ||||| | ||||| | Sbjct 1325 AGAGATCTGTTTTATGCTTTGTGGATACCAGATTTGTTTATGAAAAGAGTTGAATCCGAC 1266 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805 | | |||||||| | | || ||| | ||| |||||| | ||| | ||||||| Sbjct 1265 GATGAATGGTCTTTAATGTGCCCACATAAGTGCCCAGGTTTACACGATGTATGGGGTGAG 1206 Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCA 75865 || || |||| | || || || |||||| | ||||||||||| ||| | || | Sbjct 1205 GAATTCGAAGAATTATATACTAAATATGAAAAAGAGGGTAGAGCTAATAAAAAAATAA-A 1147 Query 75866 GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATAT 75924 | | | | ||||| || ||| | | |||||| ||||| |||||||| || || Sbjct 1146 GGCACAAACACTTTGGTTTGCAATTATTGAGTCACAGGTTGAGACAGGAACACCTTACAT 1087 Query 75925 GCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAG 75984 ||| ||||| ||||||||||| | || || || || | ||| |||||||||| | Sbjct 1086 GCTATACAAAGATGCTTGTAATAGAAAAAGCAATCAGCAAAATGTGGGAACAATTCGTTG 1027 Query 75985 CTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044 | ||| | ||||| |||||| | ||||| | ||||| | ||||| || || Sbjct 1026 CAGTAATTTATGCACTGAAATTGTGGAGTATTCTTCGCCAGATGAAATTGCTGTATGTAA 967 Query 76045 TTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGA 76104 |||||| || || || ||| | || || | | || | || ||||| | | | Sbjct 966 TTTGGCGTCTATAGCTCTTAATATGTTCGTTTCTCAGGATAAA---ACCTTTGACT-TCA 911 Query 76105 AAAACTT----CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACA 76160 | || || |||| | |||| ||| | || |||||| |||| | | || || Sbjct 910 ATAAATTAAAACATG---TTTCAAAAATTATAACGAAAAATTTAAATAAAATTATAGATG 854 Query 76161 GAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTT 76220 ||||| |||||| || || ||| || ||| | || || ||||| ||||| Sbjct 853 TAAATTATTATCCTGTCCCCGAAGCTAAAAAATCAAATTTACGGCATAGACCAATTGGAA 794 Query 76221 TGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATG 76280 | || || || || || || |||| ||||| | || | | | ||| | | Sbjct 793 TTGGGGTACAGGGACTTGCTGATGCTTTTATACTAATGCGTTTTCCTTATGAAAGCAAAG 734 Query 76281 AAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGA 76340 |||| || |||| | || |||||||| || || | | || | || || | Sbjct 733 AAGCTAAATTATTGAACCAACAAATTTTTGAAACTATTTACTATGGCGCCTTAGAAGCTA 674 Query 76341 GTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCC 76400 |||||||||| ||| ||| ||| | ||||| |||| ||| || ||||| || Sbjct 673 GTTGTGAATTAGCTCAAGAATTGGGTCCTTATGAAACATATGAAGG--CTCCCCTGTAAG 616 Query 76401 AAGGGGTGCTT--CAGTTTGATATGTGGGAAGGTGAAA-CCAAGCTCAACTACGACTGGG 76457 | |||| || || | ||| |||||| | | ||| || | | | || |||| Sbjct 615 TAAGGGTATTTTACAATATGACATGTGGAA---TAAAATCCCAACAAATTTA----TGGG 563 Query 76458 AT-GTTCTCAAGGAACGCATCAAGGAGA-----AGGGTCTTCGTAACAGTCTTTTGATGG 76511 || | ||| || || | || || | | ||| |||| || | || || | Sbjct 562 ATTGGTCTGAATTAAAGGATAAAATTGCTCAACATGGTGTTCGAAATTCGTTATTAATTG 503 Query 76512 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCAT 76571 |||||||||||||||| || ||||||||||| |||||||| ||||||| |||||||||| Sbjct 502 CACCAATGCCAACAGCATCAACCGCACAAATTTTGGGTAACAATGAATCATTTGAACCAT 443 Query 76572 ACACAACAAACATCTA 76587 ||||| |||| || || Sbjct 442 ACACATCAAATATATA 427 >seq210675 Length=2205 Score = 84.2 bits (92), Expect = 3e-11 Identities = 116/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 14425 TGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGCGTACCACCATGG 14484 |||| | || || |||||| |||| | || || ||||| | ||| || || ||||| || Sbjct 823 TGAAGTAAAAGTTGCACAATTGGCCGGATCAGTTGCGGAAATGTCAGCTTATCACCACGG 764 Query 14485 TGAAGTATCCTTAGCGGACA-CGATTGTTAAGTTGGCAAACGACTACACGGGTTCAAACA 14543 ||| ||| | | | || | |||||||| |||||| | | | | |||||||||| Sbjct 763 CGAAACATCACT-GTGTTCAACAATTGTTAATTTGGCACAGAATTTTATTGGTTCAAACA 705 Query 14544 ACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCG 14583 | ||||| | || ||||| | ||||||||||||||||| Sbjct 704 ATATTAATTTACTAGAACCCAGAGGTCAATTTGGTACGCG 665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594993783772960