Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq139863 279 1e-69 >seq139863 Length=2592 Score = 279 bits (308), Expect = 1e-69 Identities = 491/713 (69%), Gaps = 19/713 (3%) Strand=Plus/Plus Query 49647 AATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAAT 49706 ||||||| || || |||||||||| |||||| |||||||| | ||||||||||| | | Sbjct 1311 AATAATCGGTCAGCAACAAATTCAATATATTGCGACATTAAATTGCAATTCATACCAATT 1370 Query 49707 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttg---ttta 49763 || || | |||||||| ||| | |||||||| ||| |||| || |||| | || Sbjct 1371 AAATTTACAGGTAATGCGTCAGTTAAAAATTCTTGTTCAATTTTCACTGCTTCAGATATA 1430 Query 49764 attatcataattatattattttttgataatttatatttaatatgattcgcatatattaaA 49823 ||| |||||| | | || ||| | ||| |||| ||| | || | | |||||| Sbjct 1431 ATTTCAATAATTCTTTCTTTACTTGGTT-TTTGTATTAAATGT--TT---AAACATTAAA 1484 Query 49824 CATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT 49883 |||||||||||| |||||| || || || || || || | |||||| ||| |||||| Sbjct 1485 CATGCAAAATCACAATGTAATCCTTCATCTCTTGAAATTAGTTCATTTGAAAATGTTAAT 1544 Query 49884 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAAT 49943 |||||||| | || | ||||| | ||||||||||||||||||||||| | ||||||| Sbjct 1545 CCTGGCATAAGGCCACGTTTTTTTAACCAAAATATTGATGCAAAACTACCACTAAAGAAT 1604 Query 49944 ATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTA----ATTTATCATC 49999 || || || || ||||| || || || | | ||||| | |||| ||||| | | Sbjct 1605 ATTCCTTCAACTGCTGCAAAAGCAATAATACGTTCTCCATA-ATTAGCTGATTTA-CTTG 1662 Query 50000 TAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGC 50059 | |||||||| || |||||||| ||||||||||| | | | |||| |||| || || Sbjct 1663 T--TATCCAATCTAATGCCCAATCAGCTTTTTTTTTAACACATGGTAATGTTTCAATTGC 1720 Query 50060 TTTAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATA 50119 ||||| | || | |||| | ||||| | || Sbjct 1721 ATTAAAAAGGAAATCTCTTTCTTTTGGATCCTTTATATATGTATCAATTAAAATGCTGTA 1780 Query 50120 CATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGA 50179 |||||| ||||| ||| ||||||||||||||||||| |||||| | ||||| | Sbjct 1781 CATTTCGGAATGAACATTTTCCATAGCTATTTGAAATCCATAAAAACAACGCGCTTCAG- 1839 Query 50180 ATAC-TGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATG 50238 ||| |||||||| | || |||||||| | ||| || || |||||||| || | Sbjct 1840 TTACTTGAACTTCTTGACTAAAACGTTCAACAAGATTTTCGTTAACTATACCATCTGAAG 1899 Query 50239 CTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTCCC 50298 | || || ||||||||||| | | || ||||| ||| | |||| || | || Sbjct 1900 CAGCAAAAAATGCTAAAACATGTGATATGAAATGACGTTCTCCAGAAGTTAATTTGTTCC 1959 Query 50299 AAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCT 50351 | | ||| ||||||||||| ||||| || | |||||||| |||||| Sbjct 1960 AGTCCGTCATATCCTTTGATAAATCAACTTCCTCAACCGTCCAAAAAGATGCT 2012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981814521322950