Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_021781.2 Length=135281 Score E Sequences producing significant alignments: (Bits) Value seq205685 120 3e-22 >seq205685 Length=35797 Score = 120 bits (132), Expect = 3e-22 Identities = 178/249 (71%), Gaps = 4/249 (2%) Strand=Plus/Plus Query 39493 CCACATTACATGACTTCCAGTAGCTGTTCTCATTTGCAAGTAAGGTTCTACTTTAAATAG 39552 |||||| ||||| ||||| || || | ||||| || || || | |||||||||| Sbjct 17259 CCACATCGCATGAGTTCCATCGGCATTTTTGATTTGTAAATACGGATTGACTTTAAATAA 17318 Query 39553 TGCACCTTCCTCTAACTCATAAGCATCTGCTGTTTGTTTATTAGCAGGGATACCCTCTGG 39612 ||||||| ||| || |||| || || || || | ||| || |||||| ||||| Sbjct 17319 ATCACCTTCTGATAAATCCCAAGCTTCAGCAGTCTGCCTGTTACAAGAGATACCTTCTGG 17378 Query 39613 ATAGCCTTTCTGAGCTACTACAAACATGTCTTTACCATTCCAACCTGTTCTGCTAGCTTT 39672 ||| ||||| || |||| |||||| || | || ||||||||||| | | |||| Sbjct 17379 ATACCCTTTTTGGCGAACTATAAACATTCCTCTTCCGTTCCAACCTGTGCGGAATACTTT 17438 Query 39673 CTTTCCTTTTTTAATTAAAGGTAAAATCTCTTCGAATGTCA--TAATTTTCTCCTCCTTC 39730 ||||||| ||| | || || ||||||| ||||||| ||| ||| |||| | || ||| Sbjct 17439 TTTTCCTTCTTTTAAGAATGGCAAAATCTGTTCGAATTTCATTTAAATTTC-CTTCTTTC 17497 Query 39731 TATGTCTTA 39739 | | ||||| Sbjct 17498 T-TTTCTTA 17505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 431659821585154