Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_021861.1 Length=30910 Score E Sequences producing significant alignments: (Bits) Value seq111081 172 1e-38 >seq111081 Length=2465 Score = 172 bits (190), Expect = 1e-38 Identities = 161/202 (80%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 5086 AATGCCAATGGAGAACGTGAAACAGATTTTATTAACTGTGTTATCTGGCGACAACAAGCT 5145 ||||| |||||| | |||||| ||||||||||||||||||| || ||||| ||| ||| Sbjct 2260 AATGCAAATGGAAATCGTGAAGCAGATTTTATTAACTGTGTGATTTGGCGTAAACCTGCT 2319 Query 5146 GAAAATATGGCAAATTTCACACATAAAGGAAGCTTGATTGGTATCACTGGTAGAATCCAA 5205 |||| ||||| |||| | | ||||| | ||| | ||| | |||||| | |||||| Sbjct 2320 GAAACAATGGCTAATTATGCCAAGAAAGGCACATTGCTAGGTGTAACTGGTCGTATCCAA 2379 Query 5206 ACTCGAAACTATGAAAATCAACAAGGACAACGTGTTTACGTTACTGAAGTTGT-TGCAGA 5264 || |||||||||| ||||||||||| ||||||||||| || |||||| |||| ||| || Sbjct 2380 ACGAGAAACTATGAGAATCAACAAGGTCAACGTGTTTATGTGACTGAAATTGTCTGC-GA 2438 Query 5265 TAGTTTCCAACTTCTTGAAAGT 5286 || ||||||||| | |||||| Sbjct 2439 TAATTTCCAACTGTTAGAAAGT 2460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98542496419888