Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq210017 228 7e-55 seq105373 147 2e-30 >seq210017 Length=1697 Score = 228 bits (252), Expect = 7e-55 Identities = 718/1104 (65%), Gaps = 24/1104 (2%) Strand=Plus/Plus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 ||||||||| || |||| || |||| || || ||||| ||||| | |||||||||||| Sbjct 39 TTTATCTACTGTGAACTGAATAGCATTTGCAGCAGGTTTTGTTCTTAAATAATACATTCC 98 Query 138213 CGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGG 138272 ||||||| ||| || ||| || || | || || ||||| | | | || |||| Sbjct 99 AGTTTTTAGTCCAGCTTTCCAAGCATAAAAATGAATTGAAGTCAATTTACCATAGTTCGG 158 Query 138273 TTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGC 138332 || |||| | || ||||| |||||||| ||||| || ||||| || |||||| || Sbjct 159 TTCAGCCACATGAATATTAAATGATTGACTTTGATCAATAAAAGCTCCACGATCACAAGC 218 Query 138333 CATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATG 138392 | ||| | | || || ||||| || ||||| || | ||| | |||| Sbjct 219 ATAATCTATTGTACTCCTAACAGATATTTCCCATACCGTCTTATACAAATCTCTTATATT 278 Query 138393 TCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCAT 138452 | | || || || ||||||||||||| ||| | |||||| ||| |||| Sbjct 279 TTGAGGAATCTTTTCAATATTTTGAATAGACCCACGATTTGAAATGATTAAGTTTTTCAT 338 Query 138453 GTCATCGTTGTACAGATTCAACTTGATCAAG-TCGTTTATCAGATATCTGTTTATGACCT 138511 ||||| | ||| || | | || ||| || |||| || || || | | | Sbjct 339 ATCATCATCCCACAAAT-CTAGTTCTGTAAGATCTTTTAACAAATGATGATTAACAATTT 397 Query 138512 GAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATT 138571 | |||||||| | || || || ||| || || || ||| | || ||||| |||| Sbjct 398 GGAATTCACCAGATAAAACCCGGCGATTATATATATTTGATGTGTATGGTTCAAATGATT 457 Query 138572 CGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAAT 138631 | ||||| |||| ||| || || || | || || ||||| || | || | |||| Sbjct 458 CATTGTTACCCAAAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAATTAATAACGAAT 517 Query 138632 TCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAG 138691 | || | ||| || | ||| ||||| | ||||| ||||| |||| | | Sbjct 518 TTCGAACACCATGTTGAGCAATTTTATCCTTTAATTCAGACCAATCCCATAAATTTGTTG 577 Query 138692 GTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTACG 138751 | |||| |||||||| || || ||||| || ||| |||| | || |||||| || | Sbjct 578 GGATTTTATTCCACATGTCATATTGTAAAATACCCTTACTTACAGGGGAGCCTTCATATG 637 Query 138752 AATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAA 138811 || || ||| || ||||| || || || || || || | || |||||||||| Sbjct 638 TTTCATAAGGACCCAATTCTTGAGCTAATTCACAACTAGCTTCTAAGGCGCCATAGTAAA 697 Query 138812 TAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGA 138871 ||||||| ||| || || || | ||| || || ||| || || || | || | Sbjct 698 TAGTTTCAAAAATTTGTTGGTTCAATAATTTAGCTTCTTTGCTTTCATAAGGAAAACGCA 757 Query 138872 GCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGAT 138931 | | || || || || || || || || || | ||| | || | ||| || | || Sbjct 758 TTAGTATAAAAGCATCAGCAAGTCCCTGTACCCCAATTCCAATTGGTCTATGCCGTAAAT 817 Query 138932 TTGACGCTTTTGCGGCTTC---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAAT 138988 |||| |||| ||||| || ||||||||| |||||||| || ||||| ||||||| Sbjct 818 TTGA---TTTTTTAGCTTCGGGGACAGGATAATAATTTACATCTATAATTTTATTTAAAT 874 Query 138989 TTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGT 139048 || | | | || | ||| |||||| | || || | || || | Sbjct 875 TTTTCGTTATAATTTTTGAAACATGTTTTAATTTATTGAAGTCAAAGGT------TTTAT 928 Query 139049 CGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTT 139108 | | || || || || | || | | || || || | || || || || | || Sbjct 929 CCT-GA-GA----AACGAACATATTAAGAGCTATAGACGCCAAATTACATACAGCAATTT 982 Query 139109 CGTCGGGGTCGCTG--TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACC 139166 | || || || | || || |||||||| | || |||||||| || || || || Sbjct 983 CATCTGG--CGAAGAATACTCCACAATTTCAGTGCATAAATTACTGCAACGAATTGTTCC 1040 Query 139167 TAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCC 139226 | |||||| ||||||||||||| ||||||||||||||||| ||||| || ||||| || Sbjct 1041 CACATTTTGCTGATTGCTTTTTCTATTACAAGCATCTTTGTATAGCATGTAAGGTGTTCC 1100 Query 139227 AGTTTCCACTTGTGTCTCTATAAT 139250 || || || |||| ||| ||||| Sbjct 1101 TGTCTCAACCTGTGACTCAATAAT 1124 >seq105373 Length=2707 Score = 147 bits (162), Expect = 2e-30 Identities = 474/733 (65%), Gaps = 16/733 (2%) Strand=Plus/Plus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 || ||||||||||| | | ||||| | | ||| || || || | |||||||| Sbjct 75 ACTTGAAATTCACCAGAAAGAACTCGTCTATTGTATATATTTGAAGTATACGGCTCAAAA 134 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 |||||||| || || | ||| || || || | ||||| ||||| || | ||| || Sbjct 135 GATTCGTTATTACCTAAAATTTGTGCAGTAGATGCGGTTGGCATAGGGGCAATCAATAGT 194 Query 138628 GAATTCCGTAAACCGTGA--AGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAAT 138685 |||||||| | || || ||| |||| ||| || | ||||| |||||||| | Sbjct 195 GAATTCCGGACGCCATGTTTAGC--GATTTTTTCTTTTAAGTCAGACCAATCCCACAAGT 252 Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTT 138745 | | ||| |||| ||||||||||| ||||| || || || |||| | || || | Sbjct 253 CCGTGGGTGTTTTATTCCACATATCATACTGCAAAATACCTTTACTTACAGGCGAACCGT 312 Query 138746 CGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCAT 138805 || | || ||| |||| | | || ||| ||||| || || || | ||||| | Sbjct 313 TATAGGTTTCATATGAACCATATTTTTCCGCTAACTCACAACTGGCTTCCAAAGCACCGT 372 Query 138806 AGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCA 138865 ||||||| ||||| |||||| ||||| | |||| || || || || || || Sbjct 373 AGTAAATTGTTTCAAAAATCTGTTGATTCAATAATCTAGCTTCTTTACTTTCATAAGGAT 432 Query 138866 TGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGC 138925 || | | | || ||||| |||| ||||| || || | ||| | || ||||| | Sbjct 433 AACGCAATAGGATAAAAGCGTCCGCCAATCCTTGAACTCCAATTCCAATTGGTCGATGCC 492 Query 138926 GCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTA 138985 | ||| || ||| || || | || |||||||||||||| || ||||| || | Sbjct 493 TAAAATTAGATTTTTTAGCCTCTGGAAGTGGGTAATAGTTTACATCTATAATTTTATTCA 552 Query 138986 AATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGT 139045 |||||| | | || | || || ||| |||||| | | || Sbjct 553 AATTTCTTGTTATAATTTTGGAAACATTTTTCAATTCAATAAAATCAAACTTTCC----A 608 Query 139046 TGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCA 139105 | | || || ||||| | || | | ||| || || | ||||| || || | Sbjct 609 TTTGGT-AAC-------ACAAACATATTTAGAGCAATAGATGCCAAATTGCAAACGGCAA 660 Query 139106 CTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTAC 139165 ||| || | ||||| |||||||| | ||||||||| || || || || | Sbjct 661 TTTCATCTGAACAAGAATATTCCACAATTTCTGTACACAAATTGCTGCAACGAATTGTTC 720 Query 139166 CTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGC 139225 | | ||||| |||||| ||||| ||||| |||| |||||||| | ||||| || | | Sbjct 721 CAAGATTTTTTTGATTACTTTTACGGTTGCAAGTGTCTTTGTACATTATATATGGATTAC 780 Query 139226 CAGTTTCCACTTG 139238 ||||||| ||||| Sbjct 781 CAGTTTCAACTTG 793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448709212360760