Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_022776.1 Length=41757 Score E Sequences producing significant alignments: (Bits) Value seq205685 87.8 5e-13 >seq205685 Length=35797 Score = 87.8 bits (96), Expect = 5e-13 Identities = 391/608 (64%), Gaps = 16/608 (3%) Strand=Plus/Minus Query 14322 AATCATGATTGGTTTATCTGTGGGCTTCATGGCGCTAAACGTGCTGGTAAGACTGTAGTT 14381 || || ||||||||||| ||| ||||| || || || | ||||| || | | Sbjct 21473 AAACAAGATTGGTTTATAACGTTGCTGCATGGAGCGAAGCGGTCAGGTAAAACGAAAATA 21414 Query 14382 AATAACGACACTTTCGTAACTGAGTTAAGCCGTGTCAGGAAGATTGCTGACTGTTTAGGT 14441 ||||| ||| || | |||||| | ||||| || || || || || ||| Sbjct 21413 AATAATGACTTATTTCTGTTCGAGTTACGACGTGTTAGAAAAATAGCCGATGACGAAGGC 21354 Query 14442 GTAGATGAACCTATCTATATCTTAGCGGGTACATCTTCAACGTCGATACAGAACAACGTG 14501 ||| | || || || || || ||||| ||| || || |||| || || ||| | Sbjct 21353 GTAAAAGAGCCGATGTACATATTAGCTGGTGTTTCCAGTTCGACGATTCAAAAGAACATA 21294 Query 14502 CTGCAAGAACTTTATAATAAATACGGATTTGAGCCTAGATATGACAAACATGGCTCTTTT 14561 ||||||| || ||||||| ||| | || |||| ||||||||||| || |||| Sbjct 21293 TTGCAAGAGCTATATAATATGTACAACATCGAACCTAAGTATGACAAACACGGAAATTTT 21234 Query 14562 GTTTTTTGTGGAGTTAAAGTTGTCCAAGTTTACACTGGTTCAATTAGTGGTCTTAAACGT 14621 || | ||| || || || || |||| || || || ||| | || || | | Sbjct 21233 AAGTTGTTTGGCGTGAAGGTGGTACAAGCCTATACGGGAAATATTGGAGGCGTTGGAGCT 21174 Query 14622 GCCCGCGGTTTTACAGCGTTCGGCGCTTATGTTAATGAGGCATCACTTGCTAA-CGAG-T 14679 | ||| | ||||| ||||| |||||||| || || || || || || || |||| Sbjct 21173 ATTAGAGGTATGACAGCTTTCGGTGCTTATGTAAACGAAGCGTCGCTAGCCAAGCGAGAA 21114 Query 14680 TTGTTTTCAAAGAAATCATCTCACGCTGTTCTGGTGAAGGTGCTCGTGTGGTTTGGGATA 14739 ||||| | |||||| | || || |||||||| ||||| | | | | |||| Sbjct 21113 GTGTTTGC--AGAAATTGTATCGCGTTGTTCTGGAACTGGTGCAAGGATATTAGGCGATA 21056 Query 14740 GTAACCCAGATAATCCCAATCACTGGCTTAATCGAGATTATATTGGCAAAAAT--GACGG 14797 ||||||||||| || | || ||| | || || || |||| | ||| || | Sbjct 21055 CAAACCCAGATAACCCAGAACATTGGTTAAAAAAGGAATACATTG---ATAATCCGA-GT 21000 Query 14798 AAAGATTATAGA---TTTCAGCTTCAAGCTTGATGACAATACTTTCTTATCAAAACGCTA 14854 ||| || || | ||||| || || | ||||| || || || || | |||| || Sbjct 20999 AAAAATATTAAATCGTTTCATTTTGAA-TTAGATGATAACACATTTTTGGCTGAACGTTA 20941 Query 14855 TATAGACTCTATCAAAGCAGCTACGCCCAAG-GGCAAATTCTACGATAGAGATATCAATG 14913 | ||| || |||| |||||| |||||| || | || |||||| | || || || | Sbjct 20940 TCGAGAAAACATAAAAGAAGCTAC-CCCAAGCGGGATGTTTTACGATCGGGACATAAAAG 20882 Query 14914 GGCTTTGG 14921 | || ||| Sbjct 20881 GCCTGTGG 20874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133165794510926