Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq211115 114 6e-21 >seq211115 Length=3236 Score = 114 bits (126), Expect = 6e-21 Identities = 212/311 (68%), Gaps = 9/311 (3%) Strand=Plus/Plus Query 37871 TCACGCCGTCTAATTGTCAATGGATGGAATCCACATGAAGTAGATAAGGCAGCATTGCCA 37930 ||||| |||| ||| | | || || |||||| ||||| ||| || || || ||| Sbjct 567 TCACGTCGTCATATTATTAGTGCTTGAAATCCAGCAGAAGTTGATGAGATGGCTTTACCA 626 Query 37931 CCTTGTCATACATTGTTCCAGTTCTTTGT------AGAGAATGGAAAACTAAGCTGTCAG 37984 || |||||||| || | ||||| | ||| ||| ||| ||| |||| ||||| Sbjct 627 CCATGTCATACTTTAATTCAGTTTTATGTTTCAAAAGATAAT---AAATTAAGTTGTCAA 683 Query 37985 TTATATCAACGTAGTGCTGATTTCTTCTTAGGTGTTCCATTTAATATTGCAAGCTATGCG 38044 ||||||||||||||||| ||| | || ||||| || || |||||||| ||||| ||||| Sbjct 684 TTATATCAACGTAGTGCGGATGTTTTTTTAGGAGTCCCTTTTAATATCGCAAGTTATGCT 743 Query 38045 TTGCTTACACATATCGTAGCTGCAGAATGTGGATTAGAAGTTGGTGAATTTGTCTGGACT 38104 || | || ||| | | || || ||| ||| | ||||| || |||||| ||| Sbjct 744 TTATTAACCCATTTAATTGCCCAAGTTGTTGGTTTAAATGTTGGCGATTTTGTCCATACT 803 Query 38105 GGTGGTGTAGTTCACCTGTACAGTAATCACCTTGAGCAAGCTAAAAAACAATTAAGTCGT 38164 || | ||| | || | ||||| || | ||| |||| ||||||||| ||| Sbjct 804 TTAGGAGATTGTCATATTTATAAAAATCATTTTAATCAAATTAAAGAACAATTAACACGT 863 Query 38165 CCACCTGAAAA 38175 | || |||| Sbjct 864 TCTCCGCAAAA 874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248168809302661