Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq109337 87.8 2e-12 >seq109337 Length=3741 Score = 87.8 bits (96), Expect = 2e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 115141 TATGGACGAATTGCTTCAAGATCTGGTTTAAGTTTTAAAAATGGTATTGAAGTAGGAGCA 115200 ||||| ||||||||| ||||||| || ||| |||||||| |||||| || || || Sbjct 469 TATGGGCGAATTGCTCCAAGATCAGGCTTAGCGGTTAAAAATTTTATTGATGTTGGTGCT 528 Query 115201 GGTGTTGTCGATGAAGATTATCGAGATAATTTAATGGTTATTTTACATAACCATTCAGAT 115260 || || || |||||||||||||| | ||| || ||| ||||| || ||||| || Sbjct 529 GGAGTGGTAGATGAAGATTATCGTGGAAATGTAGGGGTGCTTTTATTCAATCATTCTGAA 588 Query 115261 GTTGATTTTAAAATTGAAATTAAAGATAGGATTGCGCAATTAATTGTTGAAAATGT 115316 || || | || ||| || || ||||| ||||||||| |||||| || Sbjct 589 AAGGACTTCATGGTTAAAAAAGGTGACAGAATTGCTCAATTAATTTGTGAAAAAGT 644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626870958405120