Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq105373 120 3e-22 seq23123 109 5e-19 seq139863 89.7 5e-13 >seq105373 Length=2707 Score = 120 bits (132), Expect = 3e-22 Identities = 494/776 (64%), Gaps = 31/776 (4%) Strand=Plus/Plus Query 150686 AGATTTAATTTGATTAGATCATCGACCAAGTAGCGGTTGACAACTTGAAATTCGCCCGAC 150745 ||||| | || |||| ||| | | |||| | || || ||||||||||| || || Sbjct 33 AGATTAAGATTAATTAAATCTTTAATTAAGTGATGATTAACTACTTGAAATTCACCAGAA 92 Query 150746 AAAACACGTCTCAAAAACAAATTACTGTGAA----ACGGTTCAAATGACTCGTTGTTGTT 150801 | ||| ||||| | | ||| |||| |||| ||||| || ||||| || Sbjct 93 AGAACTCGTCTATTGTATATATT----TGAAGTATACGGCTCAAAAGATTCGTTATTACC 148 Query 150802 GAGTATTTGTGCGGTCGTGGCCGTCGGCATGTACGCCACAAGCAATGAATTACGTAATCC 150861 | |||||||| || | || || ||||| || | | | |||||| || | || Sbjct 149 TAAAATTTGTGCAGTAGATGCGGTTGGCATAGGGGCAATCAATAGTGAATTCCGGACGCC 208 Query 150862 GTATTTTTGTATATTTATTTTCAACTGTGACCAGTCCCATAACGAAGTCGGTACCGTATT 150921 | ||| || ||| ||| || | ||||| ||||| || || ||| |||| Sbjct 209 ATGTTTAGCGATTTTTTCTTTTAAGTCAGACCAATCCCACAAGTCCGTGGGTGTTTTATT 268 Query 150922 CCACAAATCGTATTGCAATATTCCTTCGCTCGCTTTGCTACCGGCAAACGTGCTATAAGG 150981 ||||| ||| || ||||| || |||| || ||| ||| ||| | |||| | Sbjct 269 CCACATATCATACTGCAAAATACCTTTACT--------TACAGGCGAACC-GTTATAGGT 319 Query 150982 CTCACT---AACAGAT------GCCAGTTCGTAACTGGCCTCGAGCGCAGCATGATACAC 151032 ||| | || || || | || ||||||| || | ||| | | || | Sbjct 320 TTCATATGAACCATATTTTTCCGCTAACTCACAACTGGCTTCCAAAGCACCGTAGTAAAT 379 Query 151033 AGTTTCAGCAATTTGTTTATTCAATAGAACGGCAGCATCGCTCACGTACGGTATGCGCAA 151092 |||||| ||| |||| |||||||| || | | || | || || ||||| Sbjct 380 TGTTTCAAAAATCTGTTGATTCAATAATCTAGCTTCTTTACTTTCATAAGGATAACGCAA 439 Query 151093 CATAACAAATGCATCGGCCAAACCTTGAATGCCTATGCCGATGGGACGATGGCGCATATT 151152 | | ||| || || ||||| ||||||| || || || || || ||||| | | ||| Sbjct 440 TAGGATAAAAGCGTCCGCCAATCCTTGAACTCCAATTCCAATTGGTCGATGCCTAAAATT 499 Query 151153 AGAtttttttGCAGTTTCAATAGGGTAGAAATTGCGATCAATAATTTTATTCAAACTATT 151212 ||||||||| || | || ||||| | || ||| ||||||||||||||| | | Sbjct 500 AGATTTTTTAGCCTCTGGAAGTGGGTAATAGTTTACATCTATAATTTTATTCAAATTTCT 559 Query 151213 CACTACATGTTTGACCACAGTGTGCAATAGTTGAAAATCAAAAGTATCATTATTG----A 151268 || | |||| ||| | | |||| ||||||||| | |||| | | | Sbjct 560 TGTTATAATTTTGGAAACATTTTTCAATTCAATAAAATCAAACTTTCCATT-TGGTAACA 618 Query 151269 TATATTTATTGACGGCAATCGACGCTAGATTACATACGGCAGTTTCGTCGGGCGCGCAAT 151328 | | |||| | ||||| || || | ||| || |||||| |||| || | ||| Sbjct 619 CAAACATATTTAGAGCAATAGATGCCAAATTGCAAACGGCAATTTCATCTGAACAAGAAT 678 Query 151329 ATTGTACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACTTTGATTGC 151388 ||| || ||||| | ||||||||||||||| || ||| ||| ||||||| | Sbjct 679 ATTCCACAATTTCTGTACACAAATTGCTGCAACGAATTGTTCCAAGATTTTTTTGATTAC 738 Query 151389 TTTTGCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGA 151444 |||| |||||||||| ||| ||||| | || || || | || ||||| ||||| Sbjct 739 TTTTACGGTTGCAAGTGTCTTTGTACATTATATATGGATTACCAGTTTCAACTTGA 794 >seq23123 Length=8273 Score = 109 bits (120), Expect = 5e-19 Identities = 231/340 (68%), Gaps = 5/340 (1%) Strand=Plus/Plus Query 54601 TTATATAGTGATGCCAATAATTCCGCAACCAAGTCGGCCGCCCGAGTTACCGGTAGTTTT 54660 |||| | |||| || |||| || || ||||| ||| | || | |||||| || ||||| Sbjct 4314 TTATTTGGTGAGACCGATAACACCACATCCAAGACGGGCACCAGCGTTACCAGTTGTTTT 4373 Query 54661 GCTCAGCGGATGATCTGTGAGGCCAAGATCGTCGCGATCCGAATGTACCACCAAACTCCT 54720 ||||| |||| | | || | ||| || ||| | ||| || || || | || Sbjct 4374 GCTCAATTCATGACCCCCAACCCCTAAATCATCTATATCAGCATGAACAACTAATGTTCT 4433 Query 54721 ACCGACAATGCTATATTCGCCAAACAACGACATGACATTATCAATCTTGTCGATAGCGGT 54780 || | ||| |||| ||| ||| ||| || || | |||||| | | ||| || Sbjct 4434 TCCAATAATACTATGTTCACCACTCAATGAAATTAATTTATCAGATATATTGATTTTGGC 4493 Query 54781 AAGCGAGTTGGACACTTTTGCTTCAATGTTGCCCAAATCACCGACGTGTCTCACCGCAGC 54840 || | | ||| ||| | ||||| |||||||| |||||||| | |||| Sbjct 4494 AA-CACCATCATCACCA--GCTGTTACATTGCCTAAATCACCAACGTGTCTTTCTTCAGC 4550 Query 54841 -GTTGGGCGCACCATGATTGCTACCCGTCGGATTAAAATGTTCTCCGGCCGAAGTACAGC 54899 |||||| ||||||||| | |||| |||||||||||| |||| ||||| ||||| | Sbjct 4551 TGTTGGG-GCACCATGAGTTTTACCATGTGGATTAAAATGTGCTCCAGCCGAGGTACAAC 4609 Query 54900 CGTTGCTGATGTCGCCAAATTCGTGTACGTGAAAACCGTG 54939 | || | |||| |||||||| ||||| |||||||| || Sbjct 4610 CATTTGTATTGTCACCAAATTCATGTACATGAAAACCATG 4649 >seq139863 Length=2592 Score = 89.7 bits (98), Expect = 5e-13 Identities = 343/525 (65%), Gaps = 13/525 (2%) Strand=Plus/Minus Query 50096 TTTTTACACATTTCAAGCGGCCATGGAAAATGTTCACACACAAATGTACGGAACGTTAAT 50155 |||||| ||||||| || |||||||||||||| | |||||||| | | ||||| Sbjct 1826 TTTTTATGGATTTCAAATAGCTATGGAAAATGTTCATTCCGAAATGTACAGCATTTTAAT 1767 Query 50156 TATTACATTGATTCCGGA-CAAAAAGCAACAAGACTTAATACTCAACGCTTTCGATAATA 50214 | ||||| || ||| | ||||| || | || || | | || || | || || | Sbjct 1766 TGATACATATATAAAGGATCCAAAAGAAAGA-GATTTCCTTTTTAATGCAATTGA-AACA 1709 Query 50215 TT-CCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGACTaaaaacaaaa--aaC 50271 || || ||||| ||||| | ||||||||||| | |||| ||| || ||| | | Sbjct 1708 TTACCATGTGTTAAAAAAAAAGCTGATTGGGCATTAGATTGGA-TAACAAGTAAATCAGC 1650 Query 50272 TTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTA 50331 | | | ||| |||||| | | || ||||| ||||||||| | || ||| |||| Sbjct 1649 TAATTATGG-AGAACGTATTATTGCTTTTGCAGCAGTTGAAGGAATATTCTTTAGTGGTA 1591 Query 50332 GCTTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCA 50391 | |||||| | ||||||| | |||| ||| | ||||| || | || ||| | Sbjct 1590 GTTTTGCATCAATATTTTGGTTAAAAAAACGTGGCCTTATGCCAGGATTAACATTTTCAA 1531 Query 50392 ACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATA 50451 | || | ||||| | || |||||| | || || ||||| |||| || | || Sbjct 1530 ATGAACTAATTTCAAGAGATGAAGGATTACATTGTGATTTTGCATGTT--TAAT-GTTTA 1474 Query 50452 CGCGCGTAAATGAAAAATTATCATACGAAACAATTTTGGACATGTTCAAAGAAGCCGTCG 50511 | ||| ||||| | | |||| |||| | || || | ||||| || Sbjct 1473 AACATTTAATACAAAAACCAAGTAAAGAAAGAATTATTGAAATTATATCTGAAGCAGTGA 1414 Query 50512 ACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAA-CGCA 50570 | || ||| |||| ||||| || ||||| ||||| || || | || ||||| ||| Sbjct 1413 AAATTGAACAAGAATTTTTAACTGACGCATTACCTGTAAATTTAATTGGTATGAATTGCA 1354 Query 50571 GACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTG 50615 | | |||| | || ||||| |||||||| ||| |||| ||| Sbjct 1353 -ATTTAATGTCGCAATATATTGAATTTGTTGCTGACCGATTATTG 1310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487253529344400