Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_024206.1 Length=38269 Score E Sequences producing significant alignments: (Bits) Value seq205685 104 6e-18 >seq205685 Length=35797 Score = 104 bits (114), Expect = 6e-18 Identities = 332/507 (65%), Gaps = 20/507 (4%) Strand=Plus/Minus Query 15081 GACAGACACGGTCATTATCATCTTTTTGGTATTGATATAGTGCCAGCTTATACAGGATCA 15140 |||| |||||| ||| | | | ||||| | | | || | ||| ||||| ||| Sbjct 21251 GACAAACACGGAAATTTTAAGTTGTTTGGCGTGAAGGTGGTACAAGCCTATACGGGAAAT 21192 Query 15141 GTTCGAGGAATTGGTGCTATTCGTGGTATGACTTCTTATGGAGCTTACGTTAACGAAGCA 15200 || |||| |||| |||||| | |||||||| ||| || ||||| || |||||||| Sbjct 21191 ATTGGAGGCGTTGGAGCTATTAGAGGTATGACAGCTTTCGGTGCTTATGTAAACGAAGCG 21132 Query 15201 AGTTTAGCCACTCATGAAGTTTTTCAGGAAATCGTGCAGCGTTGTTCTG---TTGGATCA 15257 |||||| | ||||| ||| ||||| || ||||||||||| ||| Sbjct 21131 TCGCTAGCCAAGCGAGAAGTGTTTGCAGAAATTGTATCGCGTTGTTCTGGAACTGG---T 21075 Query 15258 GCAAGAATTATCTGCGACACAAACCCTGATATTCCTACACACTGGCTTAAGACAGATTAC 15317 ||||| || | |||| |||||||| |||| || ||| ||| | || | || ||| Sbjct 21074 GCAAGGATATTAGGCGATACAAACCCAGATAACCCAGAACATTGGTTAAAAAAGGAATAC 21015 Query 15318 ATAGATAATCATGATCCTAAGGCAAGGATTAAGGCGTTTAGTTTTACAATTGACGACAAC 15377 || ||||||| || ||| || ||||| ||||| |||| | | || || ||| Sbjct 21014 ATTGATAATC-CGA--GTAA---AAATATTAAATCGTTTCATTTTGAATTAGATGATAAC 20961 Query 15378 ACTTTTCTTTCGAGAGATTATGTTGAAGCATTAAAAGCTGCTACTCCAAGTGGGATGTTT 15437 || ||| | | | |||| ||| |||||| ||||| ||||| ||||||||| Sbjct 20960 ACATTTTTGGCTGAACGTTATCGAGAAAACATAAAAGAAGCTACCCCAAGCGGGATGTTT 20901 Query 15438 TATGATCGTTCAATACTTGGTCAATGGGTTACAGGTGACGGCATTGTTTATCAAGACTTT 15497 || ||||| ||| || | ||||| | | || || | ||||||| ||| ||| Sbjct 20900 TACGATCGGGACATAAAAGGCCTGTGGGTATCTGCCGAAGGTGTGGTTTATCGAGATTTT 20841 Query 15498 AAT--AA--GGACACTATGGTAATTCCGAGAGATCGTGTTCCAGATGGTTTAGATTACTA 15553 || || | ||| |||| | || || ||| | | | || | | | || || Sbjct 20840 GATTCAAGTGTACATTATGTGCAATCTGA---ATCATTGCCGAAATTATCAACA-TATTA 20785 Query 15554 TGTTGGCGTTGACTGGGGTTATGAACA 15580 | ||| ||||||||||| |||||||| Sbjct 20784 TTGTGGTGTTGACTGGGGATATGAACA 20758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122032203311374