Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_024355.1 Length=93794 Score E Sequences producing significant alignments: (Bits) Value seq205685 286 2e-72 >seq205685 Length=35797 Score = 286 bits (316), Expect = 2e-72 Identities = 237/286 (83%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 41004 GCACTGCATAGAAAGGAAACTACTATGTACTAAAAACATAAATTGCTTAGAAGAACCTTA 41063 ||||||||| || |||||||| | |||||||||||||||||||||||| ||| ||||||| Sbjct 906 GCACTGCATGGATAGGAAACTTCCATGTACTAAAAACATAAATTGCTTTGAAAAACCTTA 847 Query 41064 GAGCCTTAATGCCACAATATAGCTGAAAAGACTGTATGAAGGATTAAAAAGTTTAAGGAT 41123 |||||| | ||||||||| | |||| || ||||||||||||| ||||| ||||| Sbjct 846 GAGCCTATAAGCCACAATAGCGGAGAAATTACGCTATGAAGGATTAACAAGTTATAGGAT 787 Query 41124 TGGTTTGTTTAGCATCGCTACTCCTAAGTCTTTTAGATATGGAGAACGTTCAACGACTAG 41183 ||||| |||||||| | |||| ||| | |||| | |||| ||| ||||||||||||| Sbjct 786 TGGTTAGTTTAGCAGCACTACCCCT-ACCCTTTAAAGCATGGGGAATGTTCAACGACTAG 728 Query 41184 ACGATTGGCTCGTCGTAGGGTTTAAGTAAACTCGAAAGAAGAACTACCTAAGTATTTTAT 41243 | ||||| ||| |||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct 727 AGGATTGCCTCCTCGTAGGGTTTAAGCAAACTCGAAAGAAGAACTGCCTAAGTCTTT--G 670 Query 41244 ATATGGTAGAAAGATATAGTCTGGACACGCCTT-TAATAGGGGTGC 41288 |||||| ||||||| |||||||||||||| ||| |||| | |||| Sbjct 669 ATATGGCAGAAAGAAATAGTCTGGACACGTCTTGTAATGAGAGTGC 624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299243331011935