Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_024384.1 Length=41156 Score E Sequences producing significant alignments: (Bits) Value seq111081 84.2 6e-12 >seq111081 Length=2465 Score = 84.2 bits (92), Expect = 6e-12 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 5091 AGCTGTTGCGACTTTTACGCTAGCAGTAAATCGCCCATTTAAAAATGCACAAGGAGAACA 5150 ||| || || || ||||| ||||| |||| || |||| |||||| | ||| | | Sbjct 2217 AGCAGTGGCAACCTTTACCCTAGCGTTAAACCGTAACTTTACGAATGCAAATGGAAATCG 2276 Query 5151 AGAAGCCGATTTCATTAATTGTGTTGTTTGGCGTAAACCAGCGGAAAACGCAGCTAATTT 5210 ||||| ||||| ||||| ||||| ||||||||||||| || |||| ||||||| Sbjct 2277 TGAAGCAGATTTTATTAACTGTGTGATTTGGCGTAAACCTGCTGAAACAATGGCTAATTA 2336 Query 5211 CTTGAAAAAAGGAAGCATGGC-AGGCGTTGATGGACGTGTTCAAACTCGTAATTATGAGG 5269 || ||||| | ||| || ||| || ||| ||| | ||||| | || |||||| Sbjct 2337 TGCCAAGAAAGGCA-CATTGCTAGGTGTAACTGGTCGTATCCAAACGAGAAACTATGAGA 2395 Query 5270 A-CAGCGACGGTAAACGCGTTTTCGTTACTGA 5300 | || | | ||| |||| |||| || ||||| Sbjct 2396 ATCAAC-AAGGTCAACGTGTTTATGTGACTGA 2426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131247420568572