Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_024391.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq205685 170 5e-38 >seq205685 Length=35797 Score = 170 bits (188), Expect = 5e-38 Identities = 468/702 (67%), Gaps = 30/702 (4%) Strand=Plus/Minus Query 15551 TATATACGGACAAACAAATTGAAATATTGAAGCAAACGCAAAAACAAGATTGGTTTATGT 15610 |||||| | ||||| ||||| || ||| |||| |||||||||||||||||| Sbjct 21514 TATATAACGCAAAACAGATTGAGGTACTGACAGAAACAATAAAACAAGATTGGTTTAT-- 21457 Query 15611 TAA--TTAAT-CACGGAGCTAAGCGTACAGGTAAAACAATATTAAACAACGACTTATTTT 15667 || || | || ||||| ||||| |||||||||| | | |||| || ||||||||| Sbjct 21456 -AACGTTGCTGCATGGAGCGAAGCGGTCAGGTAAAACGAAAATAAATAATGACTTATTTC 21398 Query 15668 TACGTGAGTTAATACGTGTGCGAAAGATAGCAGACGAAGAAGG---AATTGAGACACCTC 15724 | |||||| |||||| |||| ||||| || || ||||| || ||| || Sbjct 21397 TGTTCGAGTTACGACGTGTTAGAAAAATAGCCGATGACGAAGGCGTAAAAGAG---CCGA 21341 Query 15725 AATATATACTTGCTGGTGCAAC-ATTAGGTACGATTCaaaaaaaCGTGCTAATAGAGTTA 15783 || ||| | ||||||| | | | | ||||||||||| ||| | | |||| || Sbjct 21340 TGTACATATTAGCTGGTGTTTCCAGTTCG-ACGATTCAAAAGAACATATTGCAAGAGCTA 21282 Query 15784 ACTAACAAATATGGCATTGAGTTTAATTTTGATAAATAC--AATTCATTCATGTTATTTG 15841 ||| | || ||| || ||| | ||| ||| || || | || | ||| |||| Sbjct 21281 TATAATATGTACAACATCGAACCTAAGTATGACAAACACGGAAAT--TTTAAGTTGTTTG 21224 Query 15842 GCGTTCAAGTGGTTCAGACAGGTCACAGTAAAG-TAAGTGGTATAGGAGCTATACGTGGT 15900 |||| | ||||| || | | || | ||| | | || | |||||||| | ||| Sbjct 21223 GCGTGAAGGTGGTACAAGCCTAT-ACGGGAAATATTGGAGGCGTTGGAGCTATTAGAGGT 21165 Query 15901 ATGACATCGTTTGGTGCATATATCAATGAAGCGTCGTTAGCGCATGAAGAAGTGTTTGAC 15960 |||||| | || ||||| ||| | || ||||||||| |||| | ||||||||||| Sbjct 21164 ATGACAGCTTTCGGTGCTTATGTAAACGAAGCGTCGCTAGCCAAGCGAGAAGTGTTTGCA 21105 Query 15961 GAGATTAAGTCACGTTGTAGTGGAACTGGTGCAAGAATATTGGTAGATACCAACCCTGAC 16020 || ||| || |||||| ||||||||||||||| ||||| | ||||| ||||| || Sbjct 21104 GAAATTGTATCGCGTTGTTCTGGAACTGGTGCAAGGATATTAGGCGATACAAACCCAGAT 21045 Query 16021 CATCCCGAGCATTGGTTGTTGAAAGATTATATTGAAAATACAGACCCTAAAGCAGGTATA 16080 | || || |||||||| || || || ||||| ||| | || |||| ||| Sbjct 21044 AACCCAGAACATTGGTTAAAAAAGGAATACATTGATAAT-CCGA--GTAAA-----AATA 20993 Query 16081 CTGAGT--TACCAATTTAAGCTCGATGACAATAACTTTCTTAATGATAGATATAAAGAGT 16138 | | | | || ||| | | ||||| || | ||| | ||| | ||| ||| Sbjct 20992 TTAAATCGTTTCATTTTGAATTAGATGATAACACATTTTTGGCTGAACGTTATCGAGAAA 20933 Query 16139 CTATTAAGGCTTCAACACCATCAGGTATGTTCTACGAACGTAATATCAACGGTATGTGGG 16198 || || | | || ||| || ||||| ||||| || | || || || |||||| Sbjct 20932 ACATAAAAGAAGCTACCCCAAGCGGGATGTTTTACGATCGGGACATAAAAGGCCTGTGGG 20873 Query 16199 TGTCTGGCGACGGTGTAGTATATGCCGACTTTGATTTAAATG 16240 | |||| ||| ||||| || ||| || ||||||| || || Sbjct 20872 TATCTGCCGAAGGTGTGGTTTATCGAGATTTTGATTCAAGTG 20831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133753116982462