Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_024486.1 Length=43734 Score E Sequences producing significant alignments: (Bits) Value seq109337 87.8 5e-13 >seq109337 Length=3741 Score = 87.8 bits (96), Expect = 5e-13 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 1384 GAATAGCTCCAAGATCCGGTCTAGCGGCAAAGTATTCAATTGATGTGGGCGCTGGAGTTA 1443 |||| ||||||||||| || |||||| || ||| |||||||| || |||||||| Sbjct 476 GAATTGCTCCAAGATCAGGCTTAGCGGTTAAAAATTTTATTGATGTTGGTGCTGGAGTGG 535 Query 1444 TTGACCCTGATTATCGTGGAAGTATCAGTGTTGTTTTATTTAATCATTCGGATGTGCCTT 1503 | || ||||||||||||| | | | || ||||||| |||||||| || | | Sbjct 536 TAGATGAAGATTATCGTGGAAATGTAGGGGTGCTTTTATTCAATCATTCTGAAAAGGACT 595 Query 1504 TCCATGTGTCGAGGGGAGACAGAATAGCTCAGTTAATTTGTGA 1546 || || | || |||||||| ||||| ||||||||||| Sbjct 596 TCATGGTTAAAAAAGGTGACAGAATTGCTCAATTAATTTGTGA 638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139476319109984