Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq105373 187 6e-42 seq210017 174 4e-38 seq155461 114 3e-20 >seq105373 Length=2707 Score = 187 bits (206), Expect = 6e-42 Identities = 331/482 (69%), Gaps = 3/482 (1%) Strand=Plus/Minus Query 110676 TCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAA 110735 |||| ||| ||||||||||| || | || ||||| | |||| || ||| ||| Sbjct 1177 TCAAACGGAATTGTTCCAATGCTACGTGTATTCAATAATTTAGCAAGATTTGTTGGACAA 1118 Query 110736 GGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATA 110792 |||| ||| | || || |||||||| || ||| | ||||| |||||| |||||||| Sbjct 1117 GGTGTTAATAAAAGACCCGGTTCATTTGCAATTTATTTAGAACCGTGGCATGCAGATATA 1058 Query 110793 TTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTA 110852 |||||||| ||||| | |||||| ||| |||||| | ||| | ||| | Sbjct 1057 TTTGAATTTTTAGATTTGAAAAAAAATACCGGAAAAGAAGAAATTCGTGCAAGAGATCTC 998 Query 110853 TTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGG 110912 || |||| | |||||| |||||||||| ||| |||| | || | ||||| ||| Sbjct 997 TTCTATGGGTTATGGATTCCAGATTTATTTATGGAACGCTTAGAAAATAATGGTGATTGG 938 Query 110913 TCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAA 110972 ||| | |||||||| || | ||| ||| | | ||||| | || | || || || Sbjct 937 TCTTTAATGTGTCCACACAAGTGTCCGGGTTTGTTCGATGTCTGGGGTGATGAATTCAAA 878 Query 110973 GACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAA 111032 | || ||||||||||||||||| ||||| | | | ||| | || |||| || Sbjct 877 AATCTGTACGAAAAATATGAAAACGAAGGTAGGGCTACTAAAATAGTTAAGGCTCGAGCG 818 Query 111033 CTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAA 111092 | ||||| | || ||||| | |||||||||||||| | ||| ||||| |||| ||| Sbjct 817 TTGTGGTTTAGTATAGTTGAAGCTCAAGTTGAAACTGGTAATCCATATATAATGTACAAA 758 Query 111093 GATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTG 111152 || | || || ||| |||||||| ||| | ||||||||| | || |||||| Sbjct 757 GACACTTGCAACCGTAAAAGTAATCAAAAAAATCTTGGAACAATTCGTTGCAGCAATTTG 698 Query 111153 TG 111154 || Sbjct 697 TG 696 Score = 95.1 bits (104), Expect = 3e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 112584 AAAGTTATTACACGTAACCTAAATAAAATTATTGA-CAAAACGACCTATCCAATTCAAAA 112642 ||| |||| ||| | || | ||||||||||| || |||| | || ||| ||| | | Sbjct 571 AAAATTATAACAAGAAATTTGAATAAAATTATAGATGTAAACTA-TTACCCACTTCCAGA 513 Query 112643 AGCAAAACATTCTAATAACAAGCATAGACCAATTGGCATTGGCGTACAAGGATTAGCTGA 112702 || ||| | |||||| | |||| |||||||||| ||||| || |||||||| || || Sbjct 512 GGCTAAAAAATCTAATTTTAGGCATCGACCAATTGGAATTGGAGTTCAAGGATTGGCGGA 453 Query 112703 TGTATTTATGATGATGCGAATTCCTTTTGATTCTGACCGTGCTAAATTCTTAAATGAAAA 112762 | ||||| | |||| ||||| ||| | | |||| ||| || ||| || | Sbjct 452 CGCTTTTATCCTATTGCGTTATCCTTATGAAAGTAAAGAAGCTAGATTATTGAATCAACA 393 Query 112763 GATTTTCGAAACAATCTATTTCGCTGCTATG 112793 |||||| |||||||| || | || |||| || Sbjct 392 GATTTTTGAAACAATTTACTACGGTGCTTTG 362 >seq210017 Length=1697 Score = 174 bits (192), Expect = 4e-38 Identities = 409/615 (67%), Gaps = 7/615 (1%) Strand=Plus/Minus Query 110546 TGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTC 110605 ||||||||| |||||||||| | | | || || | ||| | ||||| || | Sbjct 1626 TGATTCTATAGAAGGTATTTTTAAAACAGTTGAACAGTGTGCAATGATTTCAAAGTCAGC 1567 Query 110606 TGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACAGC 110665 ||| || |||||| | | |||||| |||||| ||| |||| ||| || || | Sbjct 1566 TGGTGGCATTGGTTTAAATGTTCATTGTATTCGTGCAACAGGAACAACAATTGCTGGTAC 1507 Query 110666 GAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATA 110725 || || | ||| | || | || || ||||| ||||| ||||| | ||| ||| Sbjct 1506 AAATGGGGTTTCTAACGGCTTAGTACCTATGTTGAGAGTTTTCAATAATGTTGCTCGATA 1447 Query 110726 TGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTTGGCA 110782 || | |||||||| || | || || | ||||| || ||||| ||||| ||||| Sbjct 1446 CGTTGACCAAGGTGGAAATAAAAGGCCAGGAGCTTTTGCAATATATCTAGAACCATGGCA 1387 Query 110783 TTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGC 110842 ||| |||||| ||||||| ||||| | || ||| ||| || ||| | |||| Sbjct 1386 TTCTGATATACTTGAATTTTTAGACTTAAAGAAGAATACTGGAAAAGAGGAAACACGAGC 1327 Query 110843 ACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAA 110902 | ||| | |||||||| ||||||| ||||||| || |||||| | ||| || | Sbjct 1326 CAGAGATCTGTTTTATGCTTTGTGGATACCAGATTTGTTTATGAAAAGAGTTGAATCCGA 1267 Query 110903 TGGCATG--TGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGA 110960 | ||| |||||| | ||||| || ||| | || ||| || ||||||| || Sbjct 1266 CG--ATGAATGGTCTTTAATGTGCCCACATAAGTGCCCAGGTTTACACGATGTATGGGGT 1209 Query 110961 AAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAATT 111020 | || || ||||| | || |||||||||||||| || | | ||| |||| Sbjct 1208 GAGGAATTCGAAGAATTATATACTAAATATGAAAAAGAGGGTAGAGCTAATAAAAAAATA 1149 Query 111021 CCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTAT 111080 || ||| ||||||||| ||| |||| ||||| ||||| || ||||| ||||| Sbjct 1148 AAGGCACAAACACTTTGGTTTGCAATTATTGAGTCACAGGTTGAGACAGGAACACCTTAC 1089 Query 111081 ATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAG 111140 || | || |||||| | |||| | ||| ||||| ||| | ||||||||| Sbjct 1088 ATGCTATACAAAGATGCTTGTAATAGAAAAAGCAATCAGCAAAATGTGGGAACAATTCGT 1029 Query 111141 TCTAGTAATTTGTGC 111155 | |||||||| ||| Sbjct 1028 TGCAGTAATTTATGC 1014 >seq155461 Length=2428 Score = 114 bits (126), Expect = 3e-20 Identities = 117/150 (78%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 167202 AATATTTCAAAAGAGCACCTAAAATCTTTATTAATTATCATTACACCACCAGCATTATCG 167261 ||||||| ||||| ||| | || || || | |||| | |||||||||||||||| Sbjct 173 AATATTTGGAAAGAACACATTAATGTTTCATCCACACTCATCATACCACCAGCATTATCG 114 Query 167262 AATTCATTCGCA-TAATTTGGTGCTGAAAATACAGTAACTAATTTACGATTGAAAAATAA 167320 ||||| | | || ||||||||||| || |||| || ||||||| ||| || ||| || Sbjct 113 AATTC-TCCACAATAATTTGGTGCAGAGAATAATGTTACTAATTGACGTTTTGCAAAAAA 55 Query 167321 TTCATAACCATCTTCAACAACTTCATGGGC 167350 ||||||||||||||||||||||| ||| || Sbjct 54 TTCATAACCATCTTCAACAACTTGATGTGC 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1183599505456637