Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_025453.1 Length=40286 Score E Sequences producing significant alignments: (Bits) Value seq205685 1261 0.0 >seq205685 Length=35797 Score = 1261 bits (1398), Expect = 0.0 Identities = 1593/2168 (73%), Gaps = 27/2168 (1%) Strand=Plus/Minus Query 30792 GGAAGCCATGAATTTTAATGGtttttttttAGAAGATTTAGTTCCAGGTTATAGAACATT 30851 |||||| |||||||||||||| ||||||||||| || | || || ||| | ||||| Sbjct 8800 GGAAGCGATGAATTTTAATGGGAAATTTTTAGAAGAGATAATCCCTGGGTATCGCACATT 8741 Query 30852 ATCTGTTGTTGGAAGAGAGTTAGCTCCTACTGAGATACAAAGCTACCAGTTGGGAATTCG 30911 ||| ||| ||| ||||| | ||| |||| || || |||||||| ||| | ||||| | Sbjct 8740 ATCAGTTTCTGGGCGAGAGCTCGCTACTACAGAAATCCAAAGCTATCAGCTAGGAATAAG 8681 Query 30912 TGATGGAATGCGACATGTTTATGCTCGTATTCCAGAAAGAGAATTAACGGTTAAATTCAA 30971 || || | |||| ||||| |||| || ||||| ||||| | || |||||| | Sbjct 8680 AGACGGGAAAAGACAGGTTTACTCTCGCATACCAGAGAGAGAGCTTACAATTAAAT--AT 8623 Query 30972 AGT-TGAG-GCTAACTCTAACGAAGCT---TTTAGGGATTCTTTTAATAGACTAAATGTT 31026 | ||| ||||| || ||| || ||| | || | || ||| |||| || | Sbjct 8622 GCTCTGATTGCTAATACT---GAATCTGACTTTCGTGACTTATTCAATCGACTGAACATC 8566 Query 31027 GCTTTGTTCACAGAAAAAGATGTACAGATTTGGTTTAATGATGAACCAGAAATGCTTTGG 31086 | || || | ||||||||||| | ||||||||||| |||||||| |||||| | ||| Sbjct 8565 ACATTATTTAGTGAAAAAGATGTTGAAATTTGGTTTAACGATGAACCTGAAATGTTATGG 8506 Query 31087 TCAGGTAGCAAGTCAGACAT-TGATGCAGTTCCTGAAGGATTGAATCGTGTCGTTGGTAC 31145 ||||| || || | | | | | || || || || ||| || | | || Sbjct 8505 AGTGGTAGTAAATCTAAAGTATCAAGT-GTACCAGATGGTACTAATAAAATCATAAGCAC 8447 Query 31146 ATTTACAATCTTGTTGAATAATCCATATAAATATACTCGAAGCGATGCTACTAGTGTTAT 31205 ||| | ||| | ||| | || |||||||||||| | ||||| || ||||| | Sbjct 8446 GTTTTCTATCACTCTTAATGACCCGTATAAATATACTAGGTCAGATGCAACAAGTGTCAC 8387 Query 31206 GTGGGGTTCTACAGAAATAACGTTTCAGGCTAACTATCTTATGGGTAATACTGGATCAGG 31265 ||||| ||| | || |||||| | ||||||||| | ||||| || ||||| || || Sbjct 8386 ATGGGGCTCTGAAACCATCACGTTTAAAGCTAACTATTTAATGGGGAACACTGGGTCTGG 8327 Query 31266 GGCTGTTGACTTACCTATTGTTATCGAAGGTGGGGCTTATTGGGGTTCTACCATGATTAC 31325 ||||| ||| | ||||||||||| ||||| |||||||||||||| || || ||||| || Sbjct 8326 TGCTGTCGACATGCCTATTGTTATTGAAGGCGGGGCTTATTGGGGATCAACTATGATAAC 8267 Query 31326 TTTTCAAAACCGTTCCTATCTAATGGGCGATAATGGTCAAGAAGTGAAGCCTATTGAAAT 31385 || ||||| |||| ||||| ||||| ||| | || |||| || ||||||||||| Sbjct 8266 ATTCCAAAATAGTTCTTATCTGATGGGGGATGACGGAACAGAATCTAAACCTATTGAAAT 8207 Query 31386 ATATCCAACTGTCGAAGGGTTAAAAGTAAAACC-GATTATTACTAT-AAAAGGTACTGGT 31443 |||||||| || || || ||||||| ||||| || | |||||| |||||||||||| Sbjct 8206 TTATCCAACGGTTGAGGGACTAAAAGTTAAACCCGA--AATACTATTAAAAGGTACTGGA 8149 Query 31444 AGAGGCGTGTGGATAAAAACTAGAAGCGATACTATTGATATTGGTGATTTTGATAAGTCA 31503 | | ||||||||| |||||| | | ||| || || || | |||||||| ||| | | Sbjct 8148 CGTGACGTGTGGATCAAAACTCGCAACGACACCATAAATTTAGGTGATTTCGATGATGCT 8089 Query 31504 GAAATAGTAATAGATACAGAACAGTTTAATATTACGAAAAATGGGAAGCCGATGATTCGT 31563 || || | || ||||| || | ||||||||||| |||||||| || ||||||||| | Sbjct 8088 GATATTTTTATTGATACGAAAAAATTTAATATTACAAAAAATGGTAACCCGATGATTAGA 8029 Query 31564 CCTATGAACGATTTTTATATTTATCCAAATGAGCCACTATACATCCAAGCGAAAGATAGT 31623 || ||||| |||||||||||||| || || || || | | |||||||||| |||||| Sbjct 8028 CCAATGAATGATTTTTATATTTACCCGAACGAACCTTTGTTTGTCCAAGCGAAGGATAGT 7969 Query 31624 ACTTTTAATCTAACTATTCGATATCCAAATCGTTTCTTATA-GGAGGTGTTACTAAAATA 31682 |||| ||| ||||| | ||| ||||| | || ||||| |||||| || | | | Sbjct 7968 GACTTTACTCTTACTATAAGGTATTCAAATAGATTTTTATAAGGAGGT--TA-TCACCT- 7913 Query 31683 TGTTGATGGCAATGGATTTAAAAAGAGAATATACGGCAGTTTTAGATAACGCTTATAATG 31742 || | ||| ||||||| ||||| | || || || || |||||||||| ||||| |||| Sbjct 7912 TGCTAATGTCAATGGACTTAAATCGGGAGTACACAGCTATTTTAGATAATGCTTACAATG 7853 Query 31743 TTGGATATGAAAAAATTGAAAACCAAATAGGTAATCTAGAATTTTCAATGCCGTTGGATG 31802 | | || |||||||||||||| || ||||||||| | ||||| | ||||| || |||| Sbjct 7852 TCAGCTACGAAAAAATTGAAAATCAGATAGGTAATATTGAATTCACGATGCCATTAGATG 7793 Query 31803 ATCCTAAAAATGAATTTTTGCAAGAAATGTTATGGGTTGAGCTAACAGATAATGAGAATG 31862 |||| || ||||| | ||||||||| | |||||||| || ||||| |||||||| ||| Sbjct 7792 ATCCAAAGAATGATTCGTTGCAAGAATTATTATGGGTAGAACTAACCGATAATGAAGATG 7733 Query 31863 AATATATAGGGTTATACCGGGTTATGCCTTCAACTGTTCGCAAAGATGCTAGTAACAATT 31922 |||| || || |||| || || ||||| ||||| ||| |||||||| ||||||||| Sbjct 7732 AATACATTGGTCTATATCGAGTGATGCCGTCAACAATTCAAAAAGATGCCAGTAACAATA 7673 Query 31923 TAATCACGTATACGGCAAATGAAGCCCTGTGTACTTTGCTAGACACAGTTCTTTTTGGTT 31982 ||| | ||||| |||| | | ||||| | || | || |||| || |||||||| | Sbjct 7672 AAATAATCTATACTGCAACTCACGCCCTAGGGACACTACTCGACAGTGTCCTTTTTGGCT 7613 Query 31983 ATCATGAACTAGTGAATCGAAAAACGGTTGATGTTATTAACTATCTTTTGAATAAACAAA 32042 | |||||| |||||||||| ||||| |||||||| ||||| ||| |||| || |||| Sbjct 7612 ACCATGAATTAGTGAATCGCAAAACTGTTGATGTGATTAATTATGTTTTAGGGAAGCAAA 7553 Query 32043 GGACAAAACACTGGGTTTTaaaaaaaTGTGAATTCACTCGGTATTTTAGTTATGCATGGG 32102 ||||| || ||||| | || || ||||| || || |||||||| || ||||| |||| Sbjct 7552 CAACAAAGCATTGGGTGCTGAAGAATTGTGAGTTTACACGGTATTTCAGCTATGCGTGGG 7493 Query 32103 AAAATGAAAATGGTCTCGCTGATGCCTTGTTTAGTATTCCTCAAGCATTTGACGAAGACT 32162 | ||||||||||| | || ||||| |||||| ||||||| |||||||||||||||| Sbjct 7492 AGAATGAAAATGGATTAGCGGATGCTTTGTTTTCTATTCCTGCTGCATTTGACGAAGACT 7433 Query 32163 ATATGTGGCAATGGAATACCAAAGTTTATCCATTCGAATTATCCTTAGTGAAGCCACCAA 32222 || | ||| ||||| | || ||||||||||||| ||| |||| | || | |||| || Sbjct 7432 ATGTTTGGGAATGGGACACACAAGTTTATCCATTTGAACTATCACTTGTTAGACCACAAA 7373 Query 32223 AAGAACCTGTTGCTCGTATTCAAGAAGGATATAATATGCAAGGGTTTGAGATTGAAAGAG 32282 |||| |||||||| ||||||||||| || ||||||||||| |||||||| |||| || Sbjct 7372 CAGAAGTAGTTGCTCGAATTCAAGAAGGGTACAATATGCAAGGTTTTGAGATCGAAAAAG 7313 Query 32283 ATCCTAACAATTTAGTTAATCGAGTTTATCCTTTAGGTGCTGGTGAAGGCGTCAATCAGA 32342 |||| || ||| | || || || |||||||||||||| | || ||||| | || |||| Sbjct 7312 ATCCGAATAATCTTGTCAACCGGGTTTATCCTTTAGGATCGGGCGAAGGAATTAACCAGA 7253 Query 32343 TAAATATTAAATCGGTAAATAAAAATATTCCTTATGTAGAAGATGCAAAG--TCTATAAA 32400 ||||||| ||||| || ||||| |||| | ||||| ||||| ||| | || ||| | Sbjct 7252 TAAATATAAAATCAGTCAATAATGGTATTTCATATGTTGAAGA--CAAGGATTCCATAGA 7195 Query 32401 AGAACATGGGTTAGTTGAATATGTTTGGGTAGACCAACGATTCACAGTTCCACAAGCTTT 32460 | || |||| ||||| |||||||||||||| ||||||||||| || ||||||| ||||| Sbjct 7194 AAAATATGGCTTAGTCGAATATGTTTGGGTGGACCAACGATTTACTATTCCACAGGCTTT 7135 Query 32461 AAAAGACAATGCAATCAACATGTTaaaaaaaTGGGCACAACCTAAAATTTCTTGGGATGT 32520 ||||| ||||| |||||||||| |||||||| | |||||| | |||| || Sbjct 7134 GAAAGATAATGCTCTCAACATGTTGGAAAAATGGTCGATTCCTAAAGTCAGTTGGTCCGT 7075 Query 32521 GACTGCGGCTGATTTATTGAAATTAACAGATGAACCTTTGAGCATTGATAAGTTAAGACA 32580 | || ||||| ||| ||| |||||||||| || | | | | || || | | | Sbjct 7074 AAACGCTGCTGACTTAACAAAACTAACAGATGACCCACTAATCGTAGACAAACTCCGTAA 7015 Query 32581 AGGAACTGTGATTATGATTAACACCGATGATTTTGGAAGTATAAATTTGCGTATTAAAAA 32640 || || | |||||||| || |||||||||| | || || | ||||| || Sbjct 7014 GGGTGGAGTTACAATGATTAATACAAATGATTTTGGCTCCGTTAACTTAAGAATTAAGAA 6955 Query 32641 AGAAACAAAACAGGATGTATTTGGCGCCCCACAAGATATTCAGTTAGAGCTTGGTAA-CT 32699 |||| | ||| ||||| || |||||||| ||| || | || ||||| | || || || Sbjct 6954 AGAAGCTAAAAGTGATGTGTTCGGCGCCCCGCAAAATTTGCAATTAGATTTGGGCAATCT 6895 Query 32700 TATCTGACGATTTTACCACGACAATGTCTGATTTGAAACGCAAACAGGAAATAAATGAGA 32759 || || ||| | || || || ||||| ||||| || ||||| | || ||||||| Sbjct 6894 TA-AAGATGATATCACGACTACGATGTCGGATTTAGGGCGTAAACAACAGATCAATGAGA 6836 Query 32760 CATACTCGCAAGGTGCAACGAATATTTTGAACTATAGTTATCAAGATAACTGCGAAAAGG 32819 ||||||| |||||||| || || ||||| || ||||| ||||||||||| || || | Sbjct 6835 CATACTCACAAGGTGCTACAAACATTTTAAATTATAGCTATCAAGATAATTGTGAGTCAG 6776 Query 32820 CATACCCAGCAGAAATTGAATTCTTCTTAGATGATGATGTATTTCATGTAAATACTGTGG 32879 |||| ||||| || || || | ||| ||||| |||||||||||||| || || || | Sbjct 6775 CATATCCAGCGATTATAGAGTTTTACTTGGATGACGATGTATTTCATGTGAACACGGTTG 6716 Query 32880 AACTGACTTTTAAAACTAAGCGCTATCGTGGTTATACAAAAGCCGTAAAAGGCGGTGGAG 32939 || |||| |||||||| || | ||||| || || || ||||| || |||||||| || | Sbjct 6715 AATTGACGTTTAAAACGAAAAGATATCGAGGATACACTAAAGCAGTCAAAGGCGGAGGGG 6656 Query 32940 CTACAGTA 32947 | | |||| Sbjct 6655 CAAGAGTA 6648 Score = 203 bits (224), Expect = 8e-48 Identities = 223/297 (75%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 33404 CCGGCACATACACACCAAATTACTTTGCCTGATCATAGTCATCCATTAGAATGGGGAATT 33463 || |||||||| || ||| | || || || || |||| ||||| | |||||||| || Sbjct 6251 CCAGCACATACGCATCAAGTCACGTTACCAGACCATACACATCCTCTCGAATGGGGGATA 6192 Query 33464 TATGAGGCACCAAGTAGCGCAACTAGTGTTGATATAGTTGTAGATGGTACCACCATTCCA 33523 || || || || | ||| |||| ||||||||||| |||||||||| | || || | Sbjct 6191 TACGAAGCTCCGAATAGTGCAAGCAGTGTTGATATCATTGTAGATGGGAAAACACTTACG 6132 Query 33524 GTACACGATACTAGCCAACAAAGACTCAACATTGTTAATTACCTTAGGAAAACTAGTGGA 33583 ||| || || ||||||||| |||| || | || | | || | ||||| | Sbjct 6131 CAACATGAGACAAGCCAACAACGACTTAATTTAGTGGACCATCTACGAAAAACAACCTCC 6072 Query 33584 GGTAAGATTTCTAGAGGTAATCATACAATCAAGATAATACCTAACAAACTTGCACGAATC 33643 || || || || ||||||||||||||||| |||| | ||| |||| |||||| ||||| Sbjct 6071 GGGAAAATATCCAGAGGTAATCATACAATACAGATTAAACCAAACAGACTTGCGAGAATC 6012 Query 33644 GAAGCGCAGGTTATTTGTCGTGTCTTTATACAATCACAATTAGGAGGACAATTTTAA 33700 |||||||| |||||||||||||| ||||| ||||||||| ||||||| ||||||||| Sbjct 6011 GAAGCGCAAGTTATTTGTCGTGTATTTATTCAATCACAACTAGGAGGTCAATTTTAA 5955 Score = 105 bits (116), Expect = 2e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33868 AGAATAGGAGTGATGGATATGGCTATTGAACAAATCAAAGAAACAGATACGCTAAATCAA 33927 ||||||| ||||| | ||||| |||||||||||||||||||||| || ||||| ||| Sbjct 5597 AGAATAGAGGTGATTTAAATGGCAGTTGAACAAATCAAAGAAACAGACACACTAAACCAA 5538 Query 33928 GGTCGAATTAAAATTAATGCGATCTTGGATCAATCAAATGCTTCTGTAGAAAAAATAAAG 33987 || || | ||||||||||| | || ||||||||||| || || |||||| || | Sbjct 5537 GGACGCGTAAAAATTAATGCTGTTTTAGATCAATCAAACGCATCATCAGAAAAGGTAGAT 5478 Query 33988 GACTATCAAGA-TCAATTAACAACAGGGATTAATGACGCCaaaaaaaTTGCTGCTGATGC 34046 | || ||||| | || | ||| ||| | || | || ||| | || |||| |||| Sbjct 5477 G-CTTACAAGACTGAACTGACAGAAGGTGTAAAACAAGCAAAAGAGATAGCTGAGAATGC 5419 Query 34047 TGGAAAAGAAGC 34058 ||| || |||| Sbjct 5418 TGGTAATCAAGC 5407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128470406708592