Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq210017 96.9 3e-15 seq105373 82.4 7e-11 >seq210017 Length=1697 Score = 96.9 bits (106), Expect = 3e-15 Identities = 310/474 (65%), Gaps = 19/474 (4%) Strand=Plus/Plus Query 147163 TGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTG 147222 || || |||||||| || || || | || |||||||| || ||||| ||||||| | Sbjct 658 TGAGCTAATTCACAACTAGCTTCTAAGGCGCCATAGTAAATAGTTTCAAAAATTTGTTGG 717 Query 147223 TTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCC 147282 || | | | ||||||| ||| || ||||| | ||||| || | ||| ||||| || Sbjct 718 TTCAATAATTTAGCTTCTTTGCTTTCATAAGGAAAACGCATTAGTATAAAAGCATCAGCA 777 Query 147283 AAACCCTGGATACCGACGCCGATAGGTCGATGCT-----TTTCGTTGCTGCGCTTCGCGC 147337 | ||||| | || | || || |||| |||| ||| || | |||||| | Sbjct 778 AGTCCCTGTACCCCAATTCCAATTGGTCTATGCCGTAAATTTGATTTTTTAGCTTCGGGG 837 Query 147338 TCGCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAG 147397 | ||||| | || ||| ||||| || || | || | || || ||| | Sbjct 838 ACA-----GGATAATAATTTACATCTATAATTTTATTTAAATTTTTCGTTATAATTTTTG 892 Query 147398 TTAT-TGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTC-GACACGTACGCATTGGTT 147455 | |||||| | ||| | ||| ||| | || || | || ||| || ||| Sbjct 893 AAACATGTTTTAA-TTTATTGAAGTCAAAGGTTTTATCCTGAGAAACGAACATATTA--- 948 Query 147456 CACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGA 147514 | || |||||||||| ||| || || || | || || |||| | |||| ||| | Sbjct 949 -AGAGCTATAGACGCCAAATTACATACAGCAATTTCATCTGGCGAAGAA-TACTCCACAA 1006 Query 147515 TTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGAT 147574 |||| | ||| | || ||||| || ||||| |||||||||||||||||| | || Sbjct 1007 TTTCAGTGCATAAATTACTGCAACGAATTGTTCCCACATTTTGCTGATTGCTTTTTCTAT 1066 Query 147575 TGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAA 147628 | || || |||||| | |||||||| ||| || ||||| || || | |||| Sbjct 1067 TACAAGCATCTTTGTATAGCATGTAAGGTGTTCCTGTCTCAACCTGTGACTCAA 1120 >seq105373 Length=2707 Score = 82.4 bits (90), Expect = 7e-11 Identities = 171/252 (68%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 146857 AGGTTTAGTTTAATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCC 146916 || || || ||||| | || | |||||| | ||||| || |||||||| || || | Sbjct 33 AGATTAAGATTAATTAAATCTTTAATTAAGTGATGATTAACTACTTGAAATTCACCAGAA 92 Query 146917 AGCACACGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAAT 146976 || || ||||| || | ||| ||| | ||||||||||| || ||||| ||||| Sbjct 93 AGAACTCGTCTATTGTATATATTTGAAGTATACGGCTCAAAAGATTCGTTATTACCTAAA 152 Query 146977 ATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTAC 147036 ||||| || || | |||||| ||||| || | ||| | |||||| || | || | Sbjct 153 ATTTGTGCAGTAGATGCGGTTGGCATAGGGGCAATCAATAGTGAATTCCGGACGCCATGT 212 Query 147037 GCACGGATGTTGTCCTTCAAAGTTTG-CCAGTCCCACATCGACGAGGGCGTCACGTTCCA 147095 | ||| || | ||| |||| | ||| ||||||| || ||| || ||||| Sbjct 213 TTAGCGAT-TTTTTCTTTTAAGTCAGACCAATCCCACAAGTCCGTGGGTGTTTTATTCCA 271 Query 147096 CATGTCGTACTG 147107 ||| || ||||| Sbjct 272 CATATCATACTG 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475352249388120