Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq105373 197 1e-45 seq210017 187 2e-42 seq139863 91.5 1e-13 >seq105373 Length=2707 Score = 197 bits (218), Expect = 1e-45 Identities = 507/759 (67%), Gaps = 26/759 (3%) Strand=Plus/Plus Query 136975 TGCTGATTTACTACTTGATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTG 137034 || ||||| ||||||||| |||| || || || |||| | ||| | ||| ||| Sbjct 63 TGATGATTAACTACTTGAAATTCACCAGAAAGAACTCGTCTATTGTATATATTTGAAGTA 122 Query 137035 AACGGCTCGAACGATTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAA 137094 ||||||| || |||||||| ||||| ||||| |||||||| | || || ||||| Sbjct 123 TACGGCTCAAAAGATTCGTTATTACCTAAAATTTGTGCAGTAGATGCGGTTGGCATAGGG 182 Query 137095 GCGATCAACAATGAATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAG 137154 || ||||| | ||||||||| | || ||| || | || || || | || ||| Sbjct 183 GCAATCAATAGTGAATTCCGGACGCCATGTTTAGCGATTTTTTCTTTTAAGTCAGACCAA 242 Query 137155 TTCCACAGATTGTTCGATTGGGTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTT 137214 | ||||| || || | ||| ||||||||| |||| ||||||||| || |||| Sbjct 243 TCCCACAA---GTCCGTGGGTGTTTTATTCCACATATCATACTGCAAAATACCTTTACTT 299 Query 137215 GCAGGACTTTCTGCATAAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGG 137274 |||| | ||| | ||||||| || | || ||| | ||| ||| Sbjct 300 ACAGGCGAACCGTTATAGGTTTCATATGAACCATATTTTTCCGCTAACTCACAACTGGCT 359 Query 137275 ACTAGTGCGCCATAGTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGG 137334 | | || || |||||||| ||||| | || | | ||||||| ||||||||||| Sbjct 360 TCCAAAGCACCGTAGTAAATTGTTTCAAAAATCTGTTGATTCAATAATCTAGCTTCTTTA 419 Query 137335 CTGTCGTAGGGCATATC-CAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACC 137393 || || || || ||| | ||||| ||||| || || | |||||||| || || || Sbjct 420 CTTTCATAAGG-ATAACGCAATAGGATAAAAGCGTCCGCCAATCCTTGAACTCCAATTCC 478 Query 137394 GATAGGTCTGTGTTTAAAATTTGATATTTGAGCGCTAACAAGCGGATAAAAGTTTGCGTC 137453 || |||| || ||||||| ||| ||| ||| ||| || ||| ||||| | || Sbjct 479 AATTGGTCGATGCCTAAAATTAGATTTTTTAGCCTCTGGAAGTGGGTAATAGTTTACATC 538 Query 137454 TATAATTCTATTGAGATTGTTAGTAACGACTCTGGACACTTTGTAGAGCAATTC---GAA 137510 ||||||| |||| | ||| | || | | | |||| || || | |||||| || Sbjct 539 TATAATTTTATTCAAATTTCTTGTTATAATTTTGGAAACATTTT---TCAATTCAATAAA 595 Query 137511 ATCGAAGCTTTTAGACTGTTTGTTA--GCAAAATTATTGACGGCAATAGAGGCTAAGTTG 137568 ||| || |||| | |||| || |||| |||| | |||||||| || || ||| Sbjct 596 ATC-AAACTTT----CCATTTGGTAACACAAACATATTTAGAGCAATAGATGCCAAATTG 650 Query 137569 CATACGGCCGTTTCTGTAT-TGTCGCTG--TATTGTACAATTTCGGCGCAAAGATTGCTG 137625 || ||||| |||| || || | |||| |||||||| | || | ||||||| Sbjct 651 CAAACGGCAATTTC---ATCTGAACAAGAATATTCCACAATTTCTGTACACAAATTGCTG 707 Query 137626 TTTCGGATCACTCCCAAATTCTTTTGATTGTTTTTCTCGTTG-ACGTGATCTTTATATAT 137684 || || ||| | ||| |||||||| |||| |||| | ||| ||||| || || Sbjct 708 CAACGAATTGTTCCAAGATTTTTTTGATTACTTTTACGGTTGCAAGTG-TCTTTGTACAT 766 Query 137685 CATATACGGAGTTCCGGTTTCGACTTGAGTCTCAACAAT 137723 ||||| ||| | || ||||| ||||||| ||||| || Sbjct 767 TATATATGGATTACCAGTTTCAACTTGAGCTTCAACTAT 805 >seq210017 Length=1697 Score = 187 bits (206), Expect = 2e-42 Identities = 711/1098 (65%), Gaps = 30/1098 (3%) Strand=Plus/Plus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 || ||||| || || | ||| || |||||||| ||||| | ||| ||||| || || ||| Sbjct 46 ACTGTGAACTGAATAGCATTTGCAGCAGGTTTTGTTCTTAAATAATACATTCCAGTTTTT 105 Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758 | || | ||| | |||| ||| || || | ||| | |||| |||| || ||| Sbjct 106 AGTCCAGCTTTCCAAGCATAAAAATGAATTGAAGTCAATTTACCATAGTTCGGTTCAGCC 165 Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818 || || ||| | ||||| || ||||| || ||| ||| || || || || || Sbjct 166 ACATGAATATTAAATGATTGACTTTGATCAATAAAAGCTCCACGATCACAAGC-ATAATC 224 Query 136819 AATAGTACTTTTTGCTTA-ATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCGG 136877 || ||||| | | | |||||||| | || ||| | | || | | ||| | || Sbjct 225 TATTGTACTCCTAACAGATATTTCCCATACCGTCTTATACAAATCTCTTATATTTTGAGG 284 Query 136878 AATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATT---TTCATCATGAGATC 136934 ||| | || ||||| || | ||| || ||| |||||| || |||| ||| Sbjct 285 AATCTTTTCAATATTTTGAATAGACCCACGATTTGAAATGATTAAGTTTTTCATATCATC 344 Query 136935 AGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTTGATA 136994 | | | | | | | ||| || || || | || | ||| ||||| || | ||| | Sbjct 345 ATCCCACAAATC-TAGTTCTGTAAGATCTTTTA-ACAA-ATGATGATTAACAATTTGGAA 401 Query 136995 TTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTCGTT 137054 ||| || |||| || | ||| || | ||| ||| | || || || ||||| || Sbjct 402 TTCACCAGATAAAACCCGGCGATTATATATATTTGATGTGTATGGTTCAAATGATTCATT 461 Query 137055 GTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATTCCG 137114 |||||||||||| ||||| || | ||||| ||||| || || || || ||||| || Sbjct 462 GTTACCCAAAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAATTAATAACGAATTTCG 521 Query 137115 TAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTTCGATTG 137174 | ||| ||| || | || | ||| | || ||| | ||| | ||| | | | Sbjct 522 AACACCATGTTGAGCAATTTTATCCTTTAATTCAGACCAATCCCATAAATTTGTTG---G 578 Query 137175 GGTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGCATAAGA 137234 | || ||||||||| ||| | || |||| || |||| |||| || |||| | Sbjct 579 GATTTTATTCCACATGTCATATTGTAAAATACCCTTACTTACAGGGGAGCCTTCATATGT 638 Query 137235 ATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATAGTAAAT 137294 ||||| | || || || | |||| ||| ||| |||||||||||||| Sbjct 639 TTCATAAGGACCCAATTCTTGAGCTAATTCACAACTAGCTTCTAAGGCGCCATAGTAAAT 698 Query 137295 AGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTCGTAGGGCATATCCAA 137354 |||||| | |||| | |||||| | ||||||||| ||| || || || | | || Sbjct 699 AGTTTCAAAAATTTGTTGGTTCAATAATTTAGCTTCTTTGCTTTCATAAGGAAAACGCAT 758 Query 137355 TATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTGTTTAAAATT 137414 || |||||||| |||||||| || | || || || || ||||| || ||||| Sbjct 759 TAGTATAAAAGCATCAGCAAGTCCCTGTACCCCAATTCCAATTGGTCTATGCCGTAAATT 818 Query 137415 TGATATTTGAG---CGCTAACAAGCGGATAAAAGTTTGCGTCTATAATTCTATTGAGATT 137471 |||| ||| || || ||| |||||| | ||| | ||||||||| |||| | ||| Sbjct 819 TGATTTTTTAGCTTCGGGGACA---GGATAATAATTTACATCTATAATTTTATTTAAATT 875 Query 137472 GTTAGTAACGACTCTGGACAC-TTTGTAGAGCAATTCGAAATCGAAGCTTTTAGACTGTT 137530 || || | | | | || || | | | | ||| ||| || ||| ||||| ||| Sbjct 876 TTTCGTTATAATTTTTGAAACATGTTTTAATTTATT-GAAGTCAAAGGTTTTATCCTG-- 932 Query 137531 TGTTAGCAAAATTATTGACGGCAATAGAGGCTAAGTTGCATACGGCCGTTTCTGTAT-TG 137589 | | || |||| | || ||||| || || || ||||| || |||| || || Sbjct 933 -AGAAACGAACATATTAAGAGCTATAGACGCCAAATTACATACAGCAATTTC---ATCTG 988 Query 137590 TCGCTG--TATTGTACAATTTCGGCGCAAAGATTGCTGTTTCGGATCACTCCCAAATTCT 137647 || | || | |||||||| | ||| | ||| ||| || || ||||| ||| | Sbjct 989 GCGAAGAATACTCCACAATTTCAGTGCATAAATTACTGCAACGAATTGTTCCCACATTTT 1048 Query 137648 TTTGATTG-TTTTTCTCGTTGACGTGATCTTTATATATCATATACGGAGTTCCGGTTTCG 137706 |||||| ||||||| | | | |||||| |||| ||| || || ||||| || || Sbjct 1049 GCTGATTGCTTTTTCTATTACAAG-CATCTTTGTATAGCATGTAAGGTGTTCCTGTCTCA 1107 Query 137707 ACTTGAGTCTCAACAATT 137724 || || | ||||| |||| Sbjct 1108 ACCTGTGACTCAATAATT 1125 >seq139863 Length=2592 Score = 91.5 bits (100), Expect = 1e-13 Identities = 215/320 (67%), Gaps = 15/320 (5%) Strand=Plus/Plus Query 110330 CAGGCAAAATCAGTGTGTAATCCTTCATCTCTAGAAATGAGTTCGTTGCTGTATGTCAAA 110389 || ||||||||| ||||||||||||||||| ||||| ||||| || |||| || Sbjct 1485 CATGCAAAATCACAATGTAATCCTTCATCTCTTGAAATTAGTTCATTTGAAAATGTTAAT 1544 Query 110390 CCGGG--TAGAGCCCCTTTTTTGTGTCTTTTATGTAGTAGATTGCGGCAAAACTTC--CG 110445 || || || ||| | ||| ||||| | | |||| |||||||| | | Sbjct 1545 CCTGGCATAAGGCCACGTTT-------TTTTAACCAAAATATTGATGCAAAACTACCACT 1597 Query 110446 GAAAAATACTCCTTCGACGATTGCAAAAGCGACCATGCGCTCGGCAAATGTAGCAGATTT 110505 || |||| |||||| || ||||||||| | || || || || | |||| ||||| Sbjct 1598 AAAGAATATTCCTTCAACTGCTGCAAAAGCAATAATACGTTCTCCATAATTAGCTGATTT 1657 Query 110506 ATTTTCTATCCACTTTTGAGCCCAAGCCGCCTTCCGTTTAACACTATCG--ATGTGCTCG 110563 | || |||||| | | |||||| | || || |||||||| || | |||| || Sbjct 1658 ACTTGTTATCCAATCTAATGCCCAATCAGCTTTTTTTTTAACAC-ATGGTAATGT-TTCA 1715 Query 110564 ATGGCATTCAAAATCCTGTCACATTCTTGAGGATCTTTAATGTATTCGACCACGAGAATG 110623 || ||||| |||| || | ||||| ||||| || || ||| | | | |||| Sbjct 1716 ATTGCATTAAAAAGGAAATCTCTTTCTTTTGGATCCTTTATATATGTATCAATTAAAATG 1775 Query 110624 TTGTACATTTCCGTGTGAAC 110643 |||||||||| | ||||| Sbjct 1776 CTGTACATTTCGGAATGAAC 1795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443918699833440