Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq210017 154 1e-32 >seq210017 Length=1697 Score = 154 bits (170), Expect = 1e-32 Identities = 435/664 (66%), Gaps = 13/664 (2%) Strand=Plus/Minus Query 8266 CCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACC 8325 || |||||||| |||||||| ||||| || ||||||||||| || ||||| || Sbjct 1094 CCTTACATGCTATACAAAGATGCTTGTAATAGAAAAAGCAATCAGCAAAATGTGGGAACA 1035 Query 8326 ATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCC 8385 ||| ||||||| ||| | ||| |||||||||| |||| |||| || ||| | || Sbjct 1034 ATTCGTTGCAGTAATTTATGCACTGAAATTGTGGAGTATTCTTCGCCAGATGAAATTGCT 975 Query 8386 GTTTGCAATCTAGCGTCGGTGTGTTTAAACGCGTTCGTTGATCGACGCTCAAACACTTAC 8445 || || ||| | ||||| | | | || ||||||| || | | | |||| || Sbjct 974 GTATGTAATTTGGCGTCTATAGCTCTTAATATGTTCGTTTCTC-AGGATAAAACCTTT-- 918 Query 8446 GACTTTGAACAATTGAAAAACGCCGTGCAAG-----TGACGGTACGCAATTTAGATCGCA 8500 ||||| | |||| ||| | | | ||| | ||| | |||||| || | Sbjct 917 GACTTCAATAAATTAAAACATGT--TTCAAAAATTATAACGAAA---AATTTAAATAAAA 863 Query 8501 TCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGCGCGTATCGAACATGCGCCACAGAC 8560 | || ||||| |||| |||||| | ||||| ||| || | || || |||| Sbjct 862 TTATAGATGTAAATTATTATCCTGTCCCCGAAGCTAAAAAATCAAATTTACGGCATAGAC 803 Query 8561 CCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTACG 8620 | |||| | || || || || || || || || ||| | |||| | || || | Sbjct 802 CAATTGGAATTGGGGTACAGGGACTTGCTGATGCTTTTATACTAATGCGTTTTCCTTATG 743 Query 8621 AAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTACGGCGCAT 8680 ||||| ||||||| | | ||| | |||| ||||| | || || ||||| | Sbjct 742 AAAGCAAAGAAGCTAAATTATTGAACCAACAAATTTTTGAAACTATTTACTATGGCGCCT 683 Query 8681 TAGAAGCCAGCTGTCAACTTGCCCGAGAATTGGGCACGTACGAATCGTACGCGGGCAGCC 8740 ||||||| || ||| || | || | ||||||||| | || ||| | || | ||| || Sbjct 682 TAGAAGCTAGTTGTGAATTAGCTCAAGAATTGGGTCCTTATGAAACATATGAAGGCTCCC 623 Query 8741 CTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGTCACGCCCACCTCTTTGTGGA 8800 ||| || || || || ||||| |||||||||||| | || || ||| ||| Sbjct 622 CTGTAAGTAAGGGTATTTTACAATATGACATGTGGAATAAAATCCCAACAAATTTATGGG 563 Query 8801 ATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGG 8860 ||||| || || || |||||||||||| ||| | || |||||| | || | | Sbjct 562 ATTGGTCTGAATTAAAGGATAAAATTGCTCAACATGGTGTTCGAAATTCGTTATTAATTG 503 Query 8861 CTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGT 8920 | ||||| || || | || || ||||| |||| ||||| ||||| ||||| || | Sbjct 502 CACCAATGCCAACAGCATCAACCGCACAAATTTTGGGTAACAATGAATCATTTGAACCAT 443 Query 8921 TCAC 8924 ||| Sbjct 442 ACAC 439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504063409078840