Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_027335.1 Length=145518 Score E Sequences producing significant alignments: (Bits) Value seq107342 165 8e-36 >seq107342 Length=1567 Score = 165 bits (182), Expect = 8e-36 Identities = 235/328 (72%), Gaps = 2/328 (1%) Strand=Plus/Minus Query 108938 AGTACACGCTAAAAGTTATTCAACAATTTTTAGCACATTTAATACACCTACAGAGATTGA 108997 ||| || ||||||||||||||| | || || || ||||| ||||| | ||| || || Sbjct 1567 AGTTCATGCTAAAAGTTATTCATCTATCTTCAGTACATTAAATACTAAAAAAGAAATCGA 1508 Query 108998 CAATATCTTTGAATGGGTAGCTACAAATAAACGTTTACAATATAAAGCTAACATTATTAA 109057 ||||||| |||||| | ||||||| | ||||| | ||||| | | || || Sbjct 1507 TGATATCTTCGAATGGACAAATACAAATGTTTATCTACAAAAAAAAGCAGAAAAAATCAA 1448 Query 109058 CGATATTTATCGAAAC-GGTACACCACTACAGAAAAAGAGTGCATCCGTACTGTTGGAGA 109116 || ||||| | |||| ||||||||| || | || || ||| |||| | || || | Sbjct 1447 TGAAATTTA-CAAAACTGGTACACCATTAGAAAAGAAAGTTGCTAGCGTATTTTTAGAAA 1389 Query 109117 GCTTCCTATTTTACTCAGGTTTTTACACACCACTACGCTATTTAGGTGAGGCAAAAATGG 109176 |||||||| ||||| |||||||| || || || ||||||||| | ||| | | Sbjct 1388 CATTCCTATTCTACTCTGGTTTTTATACGCCTCTTTACTATTTAGGCAATAATAAACTAG 1329 Query 109177 TTAATACAGCCGAAATTATTAAATTAATTATTCGTGACGAGTCTGTACATGGAACCTATA 109236 || || ||||| || ||||| ||||||||||| || ||||| |||||||| |||| Sbjct 1328 CAAACGTTGCGGAAATCATCAAATTGATTATTCGTGATGAATCTGTTCATGGAACTTATA 1269 Query 109237 TCGGCTATAAATACCAGTTAGGGTTTAA 109264 | ||||| |||| ||| ||||| || || Sbjct 1268 TTGGCTACAAATTCCAATTAGGATTCAA 1241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 464299921018960