Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq211115 118 2e-21 >seq211115 Length=3236 Score = 118 bits (130), Expect = 2e-21 Identities = 208/300 (69%), Gaps = 5/300 (2%) Strand=Plus/Minus Query 6108 TAGTTGTTCTTTTACTTGTTCAACGTGGTTTTTATAAATGTGGCAATCACCACCATTCCA 6167 || ||||||||| | ||| | || || ||||||||||| || ||||| || | | Sbjct 857 TAATTGTTCTTTAATTTGATTAAAATGATTTTTATAAATATGACAATCTCCTAAAGTATG 798 Query 6168 AATAAATTCACCAACATCTAAACCCGTAATTTGTGCAATCATATGAGTTAGTAGTGAATA 6227 | ||| || ||||||| |||||| || ||| ||||| | ||| |||| || | ||| Sbjct 797 GACAAAATCGCCAACATTTAAACCAACAACTTGGGCAATTAAATGGGTTAATAAAGCATA 738 Query 6228 ACTACTGATATTAAATGGAACTCCCAAAAATAGATCAGCGGATCTTTGATGTAGAATG-C 6286 ||| ||||||||| || ||||| ||||| | ||| || | ||||| || | || | Sbjct 737 ACTTGCGATATTAAAAGGGACTCCTAAAAAAACATCCGCACTACGTTGATATA-ATTGAC 679 Query 6287 AGCTTAGT---TTCCCTTGTACTACACAAAATTGTACAAAGCTATGACAAGGTGGCAACG 6343 | |||| | || ||| | ||| |||| || | || ||||||| ||||| || | Sbjct 678 AACTTAATTTATTATCTTTTGAAACATAAAACTGAATTAAAGTATGACATGGTGGTAAAG 619 Query 6344 TCATATCATCAAGCTCACCAACGTTCCATGCACTTAGAATATGGCGACGACCATATGGAT 6403 ||| ||||||| || | || || ||||| | |||||| ||||| |||||||| Sbjct 618 CCATCTCATCAACTTCTGCTGGATTTCAAGCACTAATAATATGACGACGTGAATATGGAT 559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1110814705236216