Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_027399.1 Length=346602 Score E Sequences producing significant alignments: (Bits) Value seq211115 123 6e-23 >seq211115 Length=3236 Score = 123 bits (136), Expect = 6e-23 Identities = 230/335 (69%), Gaps = 7/335 (2%) Strand=Plus/Plus Query 38252 TAAAAAATGATCCATATGGACGCCGACATATTCTAAGTGCATGGAATGTTGGTGAGCTTG 38311 ||||||| |||||||| ||| || |||||| | ||||| || ||| | || ||| Sbjct 550 TAAAAAAGAATCCATATTCACGTCGTCATATTATTAGTGCTTGAAATCCAGCAGAAGTTG 609 Query 38312 ATGATATGGCTCTTCAACCATGTCATAGTTTTGTTCAATGGGTAGTT---AGTGATAATA 38368 |||| |||||| | | ||||||||||| ||| |||| | ||| | ||||||| Sbjct 610 ATGAGATGGCTTTACCACCATGTCATACTTTAATTCAGTTTTATGTTTCAAAAGATAATA 669 Query 38369 AACTAAGTTGT--ATTCTGACCCAACGCTCAGCAGATACATTCTTGGGAGTTCCACTGAA 38426 || |||||||| ||| | | |||| || ||| || || ||||| || | || Sbjct 670 AATTAAGTTGTCAATTATATC--AACGTAGTGCGGATGTTTTTTTAGGAGTCCCTTTTAA 727 Query 38427 TATCACATCATATTCAGTACTCACCCATATGATAGCACAAATTACTGGATTAGAAGTTGG 38486 |||| || ||| | || | |||||| | || || ||| || ||| ||| | ||||| Sbjct 728 TATCGCAAGTTATGCTTTATTAACCCATTTAATTGCCCAAGTTGTTGGTTTAAATGTTGG 787 Query 38487 TGAATTTATCTGGAACGGTGGAGATTGTCATATTTACTTGAATCATATCGAACAAGTAAA 38546 || ||| || | ||||||||||||||||| |||||| | | ||| | || Sbjct 788 CGATTTTGTCCATACTTTAGGAGATTGTCATATTTATAAAAATCATTTTAATCAAATTAA 847 Query 38547 AGAACAATTATCACGAGATACAAAAGAATTACCAA 38581 |||||||||| |||| | | || ||||||||| Sbjct 848 AGAACAATTAACACGTTCTCCGCAAAAATTACCAA 882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1105992596535683