Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq210017 277 2e-69 seq105373 241 1e-58 >seq210017 Length=1697 Score = 277 bits (306), Expect = 2e-69 Identities = 758/1150 (66%), Gaps = 41/1150 (4%) Strand=Plus/Plus Query 130732 AAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAAC 130791 ||||||||||| |||||||| ||||| ||||| || ||||||| | || || | | Sbjct 366 AAGATCTTTTAACAAATGATGATTAACAATTTGGAATTCACCAGATAAAACCCGGCGATT 425 Query 130792 GTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGT 130851 || || || ||| | |||||||| ||||| ||||| || || |||||||| || | Sbjct 426 ATATATATTTGATGTGTATGGTTCAAATGATTCATTGTTACCCAAAATTTGTGCGGTTGA 485 Query 130852 TGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCG 130911 ||| || ||||| ||| | ||||| ||||| |||| ||| || | ||||| Sbjct 486 TGCTGTTGGCATTGGTGCAATTAATAACGAATTTCGAACACCATGTTGAGCAATTTTATC 545 Query 130912 CTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTG 130971 ||| |||||| ||||||||||| | || || || || |||||||| ||| |||| Sbjct 546 CTTTAATTCAGACCAATCCCATAAATTTGTTGG---GATTTTATTCCACATGTCATATTG 602 Query 130972 TAGTATGCCTTTACTGGCGGGACTGGATTCGAACGATTCGTAGATTCCTTCGACACGAGC 131031 || || || ||||| | || | ||| | | ||| || || | |||| Sbjct 603 TAAAATACCCTTACTTACAGGGGAGCCTTCATATGTTTCATAAGGACCCAATTCTTGAGC 662 Query 131032 CAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTTAA 131091 | || |||||||| || || || || ||||| ||||| |||||||| || || Sbjct 663 TAATTCACAACTAGCTTCTAAGGCGCCATAGTAAATAGTTTCAAAAATTTGTTGGTTCAA 722 Query 131092 TTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACC 131151 | ||| |||| ||||| || |||||||| ||||| |||||||| || || || || Sbjct 723 TAATTTAGCTTCTTTGCTTTCATAAGGAAAACGCATTAGTATAAAAGCATCAGCAAGTCC 782 Query 131152 CTGTATCCCAACGCCCACCGGTCTATGTTTTAAATTACATTTACGCGAACATTCGGTG-- 131209 ||||| ||||| || | |||||||| |||||| |||| | ||||| | Sbjct 783 CTGTACCCCAATTCCAATTGGTCTATGCCGTAAATTTGATTT---TTTAGCTTCGGGGAC 839 Query 131210 -GGATAAAGGTTAATGTCAATTATTTTGTTTAAATTGCGCACTACAATTTGTGTGACGCT 131268 |||||| || | || || ||||| |||||||| | || ||||| || || Sbjct 840 AGGATAATAATTTACATCTATAATTTTATTTAAATTTTTCGTTATAATTTTTGAAACATG 899 Query 131269 TTTCAATTTGTCGAAATCAAACGTGCCAGTTTCGAGGTTTACAAATTGATTTACACATAT 131328 ||| ||||| | ||| ||||| || | || | || || ||| | | ||| Sbjct 900 TTTTAATTTATTGAAGTCAAAGGT---TTTATCCTGAGAAACGAACATATTAAGAGCTAT 956 Query 131329 TGACGCCAGATTACAAACTGCCGTTTCGTCATAATCGC----AATACTGAACAATTTCGG 131384 ||||||| |||||| || || |||| || | || |||||| |||||||| | Sbjct 957 AGACGCCAAATTACATACAGCAATTTCATC----TGGCGAAGAATACTCCACAATTTCAG 1012 Query 131385 CGCACAAATTACTGCTCTTTATGGTGCCCAAATTTTGTTGATTGCTTTTAGCATTCACAT 131444 ||| |||||||||| || || |||| |||||| ||||||||||| ||| ||| Sbjct 1013 TGCATAAATTACTGCAACGAATTGTTCCCACATTTTGCTGATTGCTTTTTCTATT-ACAA 1071 Query 131445 G-GTCCTTGTACATCATGTAGGGCGTGCCCGTTTCGACTTGAGTTTCAATAAT--GTATC 131501 | || ||||| | |||||| || || || || || || || | |||||||| | | Sbjct 1072 GCATCTTTGTATAGCATGTAAGGTGTTCCTGTCTCAACCTGTGACTCAATAATTGCAAAC 1131 Query 131502 GAAAGAGTTTTCGAGCAGACAATTGATATTTGTATTGG-----CCGCGTTTTTCGTAATT 131556 |||| |||| | || || || ||| |||| | || |||||| || || Sbjct 1132 CAAAGTGTTT--GTGC-----CTTTATTTTTTTATTAGCTCTACCCTCTTTTTCATATTT 1184 Query 131557 TTCGTACAACGTTTCAAAGTTTTGGCCAAACGAACTGTCCAAA-TTGGGACATTCGCTGG 131615 || || ||| || | | || | | || ||| |||| || ||| Sbjct 1185 AGTATATAATTCTTCGAATTCCTCACCCCATACATCGTGTAAACCTGGGCACTTATGTGG 1244 Query 131616 GACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCC 131675 | ||||||| ||||| | ||| |||||||| |||||||||||||| || | || Sbjct 1245 G-CACATTAAAGACCATTCATCGTCGGATTCAACTCTTTTCATAAACAAATCTGGTATCC 1303 Query 131676 ATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAAT 131735 | || || || ||||||||||| ||| | | || ||| | || || | || || || | Sbjct 1304 ACAAAGCATAAAACAGATCTCTGGCTCGTGTTTCCTCTTTTCCAGTATTCTTCTTTAAGT 1363 Query 131736 TTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGC 131795 |||||| || | || || | |||||| ||||| | ||| | ||| | || ||| | Sbjct 1364 CTAAAAATTCAAGTATATCAGAATGCCATGGTTCTAGATATATTGCAAAAGCTCCTGGCC 1423 Query 131796 GCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCT 131852 ||| || ||||| | ||| | ||| | | || ||| | || | |||||| || Sbjct 1424 TTTTATTTCCACCTTGGTCAACGTATCGAGCAACATTATTGAAAACTCTCAACATAGGTA 1483 Query 131853 CCAAACCGTT 131862 | || ||||| Sbjct 1484 CTAAGCCGTT 1493 >seq105373 Length=2707 Score = 241 bits (266), Expect = 1e-58 Identities = 703/1071 (66%), Gaps = 54/1071 (5%) Strand=Plus/Plus Query 130735 ATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTA 130794 |||||| | || |||| ||||| | |||||| ||||||| || || |||||| ||| Sbjct 50 ATCTTTAATTAAGTGATGATTAACTACTTGAAATTCACCAGAAAGAACTCGTCTATTGTA 109 Query 130795 AATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGC 130854 || || || |||| ||||| |||||||| || || || |||||||| |||| ||| Sbjct 110 TATATTTGAAGTATACGGCTCAAAAGATTCGTTATTACCTAAAATTTGTGCAGTAGATGC 169 Query 130855 GGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTT 130914 ||| ||||| || | ||||| ||||| || | || || | | ||||||| || Sbjct 170 GGTTGGCATAGGGGCAATCAATAGTGAATTCCGGACGCCATGTTTAGCGATTTTTTCTTT 229 Query 130915 CAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAG 130974 || ||| ||||||||| | || ||| | || |||||||||||| | || | Sbjct 230 TAAGTCAGACCAATCCCACAAGTCCGTGGGTGTT---TTATTCCACATATCATACTGCAA 286 Query 130975 TATGCCTTTACTGGCGGGACTGGATTCGAACGATTCGTAGATTCCTTCGACACGAGCCAG 131034 || |||||||| | || ||||| || ||| || | | | || ||| Sbjct 287 AATACCTTTACTTACAGG--------CGAACCGTTA-TAGGTTTCAT----ATGAACCAT 333 Query 131035 GTCGTT--GCTA-----------GCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTT 131081 | || |||| ||||||||||| ||||| ||||| ||||| ||| | Sbjct 334 ATTTTTCCGCTAACTCACAACTGGCTTCCAAAGCACCGTAGTAAATTGTTTCAAAAATCT 393 Query 131082 GTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGT 131141 ||| ||| ||| | | |||| || || || |||||| | || || |||||||||| Sbjct 394 GTTGATTCAATAATCTAGCTTCTTTACTTTCATAAGGATAACGCAATAGGATAAAAGCGT 453 Query 131142 CTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATGTTTTAAATTACATTTACGCGAAC 131201 | || | || || | |||| || | |||| ||| | |||||| |||| | | Sbjct 454 CCGCCAATCCTTGAACTCCAATTCCAATTGGTCGATGCCTAAAATTAGATTTTTTAG-CC 512 Query 131202 ATTCG--GTGGGATAAAGGTTAATGTCAATTATTTTGTTTAAATTGCGCACTACAATTTG 131259 | | ||||| ||| ||| | || || ||||| || ||||| | || ||||| Sbjct 513 TCTGGAAGTGGG-TAATAGTTTACATCTATAATTTTATTCAAATTTCTTGTTATAATTTT 571 Query 131260 TGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCCAGTTTCGAGGT-TTACAAATTGAT 131318 | || ||||||||| ||||||||| | ||| || ||| ||||| || Sbjct 572 GGAAACATTTTTCAATTCAATAAAATCAAACTTTCCATTT----GGTAACACAAACATAT 627 Query 131319 TTACACATATTGACGCCAGATTACAAACTGCCGTTTCGTCATAATCGCAATACTGAACAA 131378 ||| | || || |||| ||| ||||| || |||| || || |||| | |||| Sbjct 628 TTAGAGCAATAGATGCCAAATTGCAAACGGCAATTTCATCTGAACAAGAATATTCCACAA 687 Query 131379 TTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAAATTTTGTTGATTGCTTTTAGCAT 131438 |||| | |||||||| |||| || || || | ||||| |||||| |||||| | Sbjct 688 TTTCTGTACACAAATTGCTGCAACGAATTGTTCCAAGATTTTTTTGATTACTTTTACGGT 747 Query 131439 TCACATGGTCCTTGTACATCATGTAGGGCGTGCCCGTTTCGACTTGAGTTTCAATAATGT 131498 | | ||| |||||||| || || || | || ||||| ||||||| |||| | | | Sbjct 748 TGCAAGTGTCTTTGTACATTATATATGGATTACCAGTTTCAACTTGAGCTTCA--ACTAT 805 Query 131499 ATCGAA--AGAGTTTTCGAGCAGACAATTGA-TATTTGTATTGGCC--GCGT---TTTTC 131550 | || | | |||||| || | ||||| || | ||| | | ||||| Sbjct 806 ACTAAACCACAACGCTCGAGC-----CTTAACTATTT-TAGTAGCCCTACCTTCGTTTTC 859 Query 131551 GTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAACTGTCCAAATTGGGACATTC 131610 || |||||||||| ||| || | | || | | | |||| ||||| | Sbjct 860 ATATTTTTCGTACAGATTTTTGAATTCATCACCCCAGACATCGAACAAACCCGGACACTT 919 Query 131611 GCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGG 131670 | |||||||||| ||||| | || || | ||| | || | |||||| ||||| || Sbjct 920 GTGTGGACACATTAAAGACCAATCACCATTATTTTCTAAGCGTTCCATAAATAAATCTGG 979 Query 131671 CACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAttttttt 131730 | ||||||| | || || |||||||| || | |||||| | || || ||||||| Sbjct 980 AATCCATAACCCATAGAAGAGATCTCTTGCACGAATTTCTTCTTTTCCGGTATTTTTTTT 1039 Query 131731 CAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781 ||||| |||||| || || || || |||||||| ||||| ||||| | ||| Sbjct 1040 CAAATCTAAAAATTCAAATATATCTGCATGCCACGGTTCTAAATAAATTGC 1090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423840012924504