Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_028700.1 Length=37976 Score E Sequences producing significant alignments: (Bits) Value seq111081 132 1e-26 >seq111081 Length=2465 Score = 132 bits (146), Expect = 1e-26 Identities = 179/247 (72%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 9265 AGCTGTAGCTACGTTCACACTTGCGGTAAACCGCAGATTTAAAGAGCAAAACGGGGAGAG 9324 ||| || || || || || || ||| ||||||| | |||| | ||| || | | Sbjct 2217 AGCAGTGGCAACCTTTACCCTAGCGTTAAACCGTAACTTTACGAATGCAAATGGAAATCG 2276 Query 9325 AGAAGCAGATTTCATTAATTGTGTTATCTGGCGACAGTCTGCTGAAAATTTAGCCAACTG 9384 ||||||||||| ||||| ||||| || ||||| | ||||||||| | || || | Sbjct 2277 TGAAGCAGATTTTATTAACTGTGTGATTTGGCGTAAACCTGCTGAAACAATGGCTAATTA 2336 Query 9385 GGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGTAACTACGAAAA 9444 || || ||||| | ||| | || || || |||||||| || || | ||||| || || Sbjct 2337 TGCCAAGAAAGGCACATTGCTAGGTGTAACTGGTCGTATCCAAACGAGAAACTATGAGAA 2396 Query 9445 CCAACAAGGACAACGTGTCTATGTAACAGAAGTTGT-TGCAGAGAACTTCCAAATGTTGG 9503 |||||||| |||||||| ||||| || ||| |||| ||| || || |||||| |||| | Sbjct 2397 TCAACAAGGTCAACGTGTTTATGTGACTGAAATTGTCTGC-GATAATTTCCAACTGTTAG 2455 Query 9504 AAAGTCG 9510 ||||||| Sbjct 2456 AAAGTCG 2462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121096956114852