Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_028917.1 Length=41931 Score E Sequences producing significant alignments: (Bits) Value seq205685 161 3e-35 >seq205685 Length=35797 Score = 161 bits (178), Expect = 3e-35 Identities = 354/519 (68%), Gaps = 20/519 (4%) Strand=Plus/Plus Query 21858 ATTTTCAATATAATCTTTCAACAACCAATGCTCGGGATGGTCAGGGTTGGTATCTACCAA 21917 ||| ||||| || || || |||||||| || || | || ||||| ||||| | || Sbjct 21006 ATTATCAATGTATTCCTTTTTTAACCAATGTTCTGGGTTATCTGGGTTTGTATCGCCTAA 21065 Query 21918 TATTCTTGCACCAGTTCCACTACAACGTGACTTAATCTCGTCAAACACCTCTTCATGCGC 21977 ||| ||||||||||||||| |||||| || ||| || ||||||| ||| | || Sbjct 21066 TATCCTTGCACCAGTTCCAGAACAACGCGATACAATTTCTGCAAACACTTCTCGCTTGGC 21125 Query 21978 TAACGACGCTTCATTGATATATGCACCAAACGATGTCATACCACGTATAGCTCCTATACC 22037 || ||||||||| || | ||| ||||| || | ||||||||| | |||||||| | || Sbjct 21126 TAGCGACGCTTCGTTTACATAAGCACCGAAAGCTGTCATACCTCTAATAGCTCCAACGCC 21185 Query 22038 ACTTA-CTTTACTGTGACCTGTCTGAACCACTTGAACGCCAAATAACATGAATGAATT-- 22094 | | ||| | || | | || ||||| | |||||||| ||| | || | || Sbjct 21186 TCCAATATTTCCCGT-ATAGGCTTGTACCACCTTCACGCCAAACAACTTAAA--ATTTCC 21242 Query 22095 ATATTTATCAAAATTAAACTCAATGCCATATTTGTTAGTTAACTCTATTAGTACGttttt 22154 | ||| ||| | ||| || ||| || | ||| || |||| | || ||| || Sbjct 21243 GTGTTTGTCATACTTAGGTTCGATGTTGTACATATTATATAGCTCTTGCAATATGTTCTT 21302 Query 22155 ttGAATCGTACCTAAT-GTTGCACCAGCAAGTATATATTGAGGTGTCTCAATT---CCTT 22210 ||||||||| | | | | ||||||| | ||| || || ||| || |||| Sbjct 21303 TTGAATCGT-CGAACTGGAAACACCAGCTAATATGTACATCGG---CTCTTTTACGCCTT 21358 Query 22211 CTTCGTCTGCTATCTTTCGCACACGCATTAACTCACGTAAAAATAAGTCATTGTTTAATA 22270 | || || ||||| |||| ||||| |||||| | |||||||||||| |||| | Sbjct 21359 CGTCATCGGCTATTTTTCTAACACGTCGTAACTCGAACAGAAATAAGTCATTATTTATTT 21418 Query 22271 TTGTTTTACCTGTACGCTTTGCTCCGTG-ATTAA--TTAACATAAACCAATCTCGTTTTT 22327 | |||||||||| ||||| ||||| || | || || |||||||||||| ||||| Sbjct 21419 TCGTTTTACCTGACCGCTTCGCTCCATGCAGCAACGTT---ATAAACCAATCTTGTTTTA 21475 Query 22328 GCGTTTGCTTCAATATTTCAATTTGTTTGTCCGTATATA 22366 |||| ||| || ||||| ||||| | |||||| Sbjct 21476 TTGTTTCTGTCAGTACCTCAATCTGTTTTGCGTTATATA 21514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133721197282922