Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_028984.1 Length=30664 Score E Sequences producing significant alignments: (Bits) Value seq111081 154 3e-33 >seq111081 Length=2465 Score = 154 bits (170), Expect = 3e-33 Identities = 178/237 (75%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 27873 GCAAACTTTACGCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCT 27932 |||| |||||| || ||| | |||||||| |||| ||| |||||| | |||||||| Sbjct 2224 GCAACCTTTACCCTAGCGTTAAACCGTAACTTTACGAATGCAAATGGAAATCGTGAAGCA 2283 Query 27933 GATTTCATTAATATCGTGATTTGGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAA 27992 ||||| ||||| |||||||||||| | | ||||||| | ||||| | || || Sbjct 2284 GATTTTATTAACTGTGTGATTTGGCGTAAACCTGCTGAAACAATGGCTAATTATGCCAAG 2343 Query 27993 AAAGGGACTCTTTTAGGCATTACTGGTCGAATTCAGACCCGCAATTATGAAAACCAACAA 28052 ||||| || | |||| | |||||||| || || || | || ||||| || |||||| Sbjct 2344 AAAGGCACATTGCTAGGTGTAACTGGTCGTATCCAAACGAGAAACTATGAGAATCAACAA 2403 Query 28053 GGTCAGCGTGTTTACGTCACAGAAGTTGT-TGCGGATAATTTCCAAATTTTGGAAAG 28108 ||||| |||||||| || || ||| |||| ||| |||||||||||| | || ||||| Sbjct 2404 GGTCAACGTGTTTATGTGACTGAAATTGTCTGC-GATAATTTCCAACTGTTAGAAAG 2459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97757271811204