Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq172545 125 2e-23 seq31233 100 7e-16 >seq172545 Length=6599 Score = 125 bits (138), Expect = 2e-23 Identities = 138/184 (75%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 7542 TGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTT 7601 ||| ||| |||| |||| ||||| ||| |||| || ||||||||||| || ||||| || Sbjct 4946 TGGGAATGACCAAATTTATAACGTAATTGTTACAGCTCATGCCTTTGTAATAATTTTTTT 4887 Query 7602 TTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGG 7661 | | || || || |||| || || || || ||||||||| | ||||| | || | || Sbjct 4886 TATAGTAATACCCATTATAATTGGGGGATTTGGAAATTGACTTGTTCCCCTCATACTAGG 4827 Query 7662 TGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTC 7721 || ||||| || || ||||| | | || |||||||||||||||||| |||| || || Sbjct 4826 GGCCCCTGACATAGCCTTTCCCCGAATAAATAATATAAGTTTTTGATTATTACCCCCCTC 4767 Query 7722 CTTA 7725 ||| Sbjct 4766 TTTA 4763 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| ||||| ||||||||||| ||||||||||| ||||| ||||| || || || || | Sbjct 4373 TTCTGGATGTCCAAAAAATCAAAATAAATGTTGGTAAAGAATAGGGTCTCCACCCCCGGC 4432 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 ||| |||||||| ||||| ||||||| ||| || |||| Sbjct 4433 TGGGTCAAAAAAAGATGTATTTAAATTTCGATCTGTCAAAA 4473 >seq31233 Length=3053 Score = 100 bits (110), Expect = 7e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||| ||||||||||| || || ||||| ||||| || ||||| || |||||||| Sbjct 1947 GAAAATTTGTCCATCAGTAATTGAAATTACATTGGTAGGAATGTAAGCGGATACATCACC 1888 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 ||||| ||||| | ||| |||||||| || | ||| || ||||| Sbjct 1887 AGCTTGGGTTTCAATAACTGGTAAGGCAGTCAATGAGCCGCCACC 1843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1189302422893998