Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq139863 398 6e-106 >seq139863 Length=2592 Score = 398 bits (440), Expect = 6e-106 Identities = 514/706 (73%), Gaps = 4/706 (1%) Strand=Plus/Plus Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436 ||||||||||| |||||||| ||||| || ||| | | ||| || || |||||||| Sbjct 1314 AATCGGTCAGCAACAAATTCAATATATTGCGACATTAAATTGCAATTCATACCAATTAAA 1373 Query 4437 CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATA 4496 | ||||||| |||| || ||||| |||||||| || | || ||||| | || || Sbjct 1374 TTTACAGGTAATGCGTCAGTTAAAAATTCTTGTTCAATTTTCACTGCTTCAGATATAATT 1433 Query 4497 TCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAA 4556 || | ||| | |||||| |||||| | || ||| | | ||||| |||||| |||||| Sbjct 1434 TCAATAATTCTTTCTTTACTTGGTTTTTGTATTAAATGTTTAAACATTAAACATGCAAAA 1493 Query 4557 TCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATT 4616 |||||||| || ||||| ||||| ||| ||||| || ||||| |||||||| ||||| Sbjct 1494 TCACAATGTAATCCTTCATCTCTTGAAATTAGTTCATTTGAAAATGTTAATCCTGGCATA 1553 Query 4617 AAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCT 4676 | || | ||||| | ||||||||| | ||||| ||| ||||||||| ||||| Sbjct 1554 AGGCCACGTTTTTTTAACCAAAATATTGATGCAAAACTACCACTAAAGAATATTCCTTCA 1613 Query 4677 ACGGCGGCAAACGCTACTAATCGGGACCCGA--ACGAGCTGGCTTTGTCTTTAATCCATT 4734 || || ||||| || | |||| | | | | | ||||| || | ||| |||| | Sbjct 1614 ACTGCTGCAAAAGCAA-TAATACGTTCTCCATAATTAGCTGATTTACTTGTTA-TCCAAT 1671 Query 4735 TTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATT 4794 ||||||||| | ||||||||| ||||| || || | ||| | || || ||||| | Sbjct 1672 CTAATGCCCAATCAGCTTTTTTTTTAACACATGGTAATGTTTCAATTGCATTAAAAAGGA 1731 Query 4795 TACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAAT 4854 | | |||| ||| || | ||||| || || |||| | ||| |||||||| |||| Sbjct 1732 AATCTCTTTCTTTTGGATCCTTTATATATGTATCAATTAAAATGCTGTACATTTCGGAAT 1791 Query 4855 GTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTT 4914 | | |||||| ||||| || |||||||| ||||| || | ||||| ||||||||||||| Sbjct 1792 GAACATTTTCCATAGCTATTTGAAATCCATAAAAACAACGCGCTTCAGTTACTTGAACTT 1851 Query 4915 CGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACG 4974 | | || ||| | ||| || | |||||||| |||||||| || || |||||||| | Sbjct 1852 CTTGACTAAAACGTTCAACAAGATTTTCGTTAACTATACCATCTGAAGCAGCAAAAAATG 1911 Query 4975 CCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAAT 5034 | |||||||| ||||| || | |||| ||| | | ||| ||||||| | || || Sbjct 1912 CTAAAACATGTGATATGAAATGACGTTCTCCAGAAGTTAATTTGTTCCAGTCCGTCATAT 1971 Query 5035 CTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 | || | |||||||||||| ||||| |||||||| || ||||| || Sbjct 1972 CCTTTGATAAATCAACTTCCTCAACCGTCCAAAAAGATGCTTCAGC 2017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425949765383561