Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_031016.1 Length=40273 Score E Sequences producing significant alignments: (Bits) Value seq205685 787 0.0 >seq205685 Length=35797 Score = 787 bits (872), Expect = 0.0 Identities = 922/1240 (74%), Gaps = 12/1240 (1%) Strand=Plus/Plus Query 22636 TATAAATCGCATATCGCAAAGAGTCAAGTACATCATCGAATAGTTTTATTGGTTCTCCtt 22695 ||||||||||||||| | || || ||||||||||| ||| ||| || ||||| |||| Sbjct 20357 TATAAATCGCATATCTAAGCGAATCGAGTACATCATCAAATTCTTTGATAGGTTCGCCTT 20416 Query 22696 ttttttCATCCCAAACATATTGATAAATCTCATTAGGAAATTTATCAACTTTATCTCTAC 22755 | |||| ||||| || || || || || || | ||| || || ||||| ||||||| Sbjct 20417 TCTTTTTGTCCCATACGTACTGGTATATTTCGTCTTTAAACTTTTCTACTTTGTCTCTAC 20476 Query 22756 AAACAAACAACTTATCTTTCTT-AAATCTACGAGCGACTGCTTCAACACCAGTTAAACGT 22814 | | ||| | || | | | || |||| | || || | |||||| |||| ||| | | Sbjct 20477 AGATAAAAAGTTTGTTTGTTTTGAAATGTTTT-GCCACGGATTCAACTCCAGATAATCTT 20535 Query 22815 GCTTTGTCTCCATTAAACGCTTCAATGTGTTCTCGTTTAAACCTATCAACATGTTCAGGG 22874 || || ||| ||||| || | ||| |||||||| || || | || |||||||| Sbjct 20536 GCCTTATCTGCATTATGAGCATTTATGCCTTCTCGTTGGAATCTGGCGACGTGTTCAGGT 20595 Query 22875 CGAGCAGAATCACAATAGAAGGGGACTCTTGAACCATAACGTTCTTGAATACCTTTAGCT 22934 | || |||||| | || || || || | || ||||| ||| || ||||| ||| Sbjct 20596 CTTGCGCTATCACACCAAAAAGGCACCCTAGTCCCGTAACGGGATTGGATCCCTTTCGCT 20655 Query 22935 ATATCTACCCAATAGTCAATTTCTTCATGTTGTTTTGCGTGCTCTTCGATTAAATAAGCT 22994 | |||||||||||| || |||||||||| ||| || || ||||| |||||||| | | Sbjct 20656 ACATCTACCCAATAATCTATTTCTTCATACTGTGAGGCATGTTCTTCTATTAAATATGAT 20715 Query 22995 GTTCCATCATCCGTTTCTCCGATAACAACAATTGAACCCCAGTGTTCATACCCCCAGTCA 23054 || ||||| ||||| |||||||| | || || ||||| |||||||| ||||||||| Sbjct 20716 ACCCCGTCATCTGTTTCGCCGATAACGATTATAGACCCCCAATGTTCATATCCCCAGTCA 20775 Query 23055 ACACCGCAATAGAATGTTGATAGTTTAGGTAAGTCTTTGGATTGTATATAGTGTTTGTTG 23114 ||||| ||||| ||||||||| ||| || || || ||||| | ||| ||| | Sbjct 20776 ACACCACAATAATATGTTGATAATTTCGGCAATGATTCAGATTGCACATAATGTACACTT 20835 Query 23115 CTATCAAAGTCTTGATAAACCACACCGTCAGCAGATACCCAAAGTCCTTTTATATCACGG 23174 |||||| ||| ||||||||||||| || ||||||||||| || |||||||| || || Sbjct 20836 GAATCAAAATCTCGATAAACCACACCTTCGGCAGATACCCACAGGCCTTTTATGTCCCGA 20895 Query 23175 TCATAAAACATACCGCTTGGCGTTGCTGCCTTGATATTTTCACGGTACCTCTCAGATAAG 23234 || |||||||| |||||||| || ||| | || || ||||| || || | |||| || Sbjct 20896 TCGTAAAACATCCCGCTTGGGGTAGCTTCTTTTATGTTTTCTCGATAACGTTCAGCCAAA 20955 Query 23235 AAAGTATTATCATCTAATTCAAAATGAAAAGCCTTAACATTTTCGTTAGGCTTATCTATA 23294 || || ||||||||||||||||||||||| | |||| ||||| | || ||||| || Sbjct 20956 AATGTGTTATCATCTAATTCAAAATGAAACGATTTAATATTTTTACTCGGATTATCAATG 21015 Query 23295 TATTCTTTCTTTAACCAATGCTCAGGATTATCAGGGTTAGTATCTGCTAGAATTCTTGCT 23354 ||||| || ||||||||||| || || ||||| ||||| ||||| ||| || ||||| Sbjct 21016 TATTCCTTTTTTAACCAATGTTCTGGGTTATCTGGGTTTGTATCGCCTAATATCCTTGCA 21075 Query 23355 CCATTCCCCGAACAACGAGAAACAATTTCACCAAATACTTCTTGTTTAGCAAGAGACGCT 23414 ||| | || |||||||| || |||||||| |||| |||||| | || || || |||||| Sbjct 21076 CCAGTTCCAGAACAACGCGATACAATTTCTGCAAACACTTCTCGCTTGGCTAGCGACGCT 21135 Query 23415 TCATTGACATAAGCACCATAAGCAGTCATACCACGAATAGCACCAACTCCACCGATATTT 23474 || || ||||||||||| |||| |||||||| | |||||| ||||| || || |||||| Sbjct 21136 TCGTTTACATAAGCACCGAAAGCTGTCATACCTCTAATAGCTCCAACGCCTCCAATATTT 21195 Query 23475 CCAGTATATGCTTGAACTACTTTTACACCAAATAATTTAAAGTTATTGTGCTTATCAAAC 23534 || ||||| ||||| || || || || ||||| || ||||| || ||| || ||| || Sbjct 21196 CCCGTATAGGCTTGTACCACCTTCACGCCAAACAACTTAAAATTTCCGTGTTTGTCATAC 21255 Query 23535 TTGGGCTCTATATTGTACATGTTATAAAGTTCTTGGAGGATGTTCTTGTTGATTGT--AT 23592 || || || || |||||||| ||||| || ||||| | |||||||| | || || | Sbjct 21256 TTAGGTTCGATGTTGTACATATTATATAGCTCTTGCAATATGTTCTTTTGAATCGTCGAA 21315 Query 23593 TTGATGAAACACCAGCCAATATATACATAGGCTCTTTCACACCTTCTTCATCAGCTATTT 23652 || ||||||||||| ||||| ||||| |||||||| || ||||| ||||| ||||||| Sbjct 21316 CTG--GAAACACCAGCTAATATGTACATCGGCTCTTTTACGCCTTCGTCATCGGCTATTT 21373 Query 23653 TACGAACACGCCTTAATTCAAACAAGAATAAATCATTATTCATCTTTGTTTTACCTGAAC 23712 | | |||||| | ||| || |||| ||||| |||||||| || || ||||||||||| | Sbjct 21374 TTCTAACACGTCGTAACTCGAACAGAAATAAGTCATTATTTATTTTCGTTTTACCTGACC 21433 Query 23713 GCTTAGCACCATGAAGTAAAGCAATAAACCAATCTTTATTTACTGTTTGCTTTAAAACAT 23772 |||| || ||||| || || | ||||||||||||| |||| ||||| | | || | Sbjct 21434 GCTTCGCTCCATGCAGCAACGTTATAAACCAATCTTGTTTTATTGTTTCTGTCAGTACCT 21493 Query 23773 CGATTTGTTTTTTGCTATAAATATCACTTA---TCATCTATAACCTCACTAATCTTACCA 23829 | || |||||| | |||| | |||| ||| ||| || | | |||||||| | Sbjct 21494 CAATCTGTTTTGCGTTATATACATCAGTTAGTGCCATTTAATTCACCGCTAATCTTGTTA 21553 Query 23830 AGCAATTCATCCAATTTTTCTTCAGTTGATTTATCAGTTG 23869 || || ||||| | ||| |||||||||| | ||||||| Sbjct 21554 AGTAACTCATCAAGTTTATCTTCAGTTG---TTTCAGTTG 21590 Score = 91.5 bits (100), Expect = 4e-14 Identities = 71/82 (87%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 18557 TTCCTTTCC-ATAGCTTTTAGAGTGGTTCAATGCTTGCACTTCCGAAGCTTTTAATGTCA 18615 ||||||||| ||| |||||| |||| | ||||||||||||||| |||||||||||||| Sbjct 17117 TTCCTTTCCCATATCTTTTAACGTGGATAAATGCTTGCACTTCCATAGCTTTTAATGTCA 17176 Query 18616 TC-ACGCTTGGACATAAGAAAA 18636 || | |||||||||||| |||| Sbjct 17177 TCAATGCTTGGACATAACAAAA 17198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128428911099190