Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_031023.1 Length=32649 Score E Sequences producing significant alignments: (Bits) Value seq111081 172 1e-38 seq205685 116 8e-22 >seq111081 Length=2465 Score = 172 bits (190), Expect = 1e-38 Identities = 187/248 (75%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 26945 GCAGTAGCATCTTTCAGCCTTGCGGTTAACCGTAACTTTAAAGACGCTAACGGAGAGCGT 27004 ||||| ||| | || | ||| ||| | ||||||||||||| | || || ||| | ||| Sbjct 2218 GCAGTGGCAACCTTTACCCTAGCGTTAAACCGTAACTTTACGAATGCAAATGGAAATCGT 2277 Query 27005 GAAACTGACTTTATTAACTGTGTCATTTGGCGACAACAGGCTGAAAATTTGGCTAATTGG 27064 ||| | || |||||||||||||| |||||||| ||| ||||||| ||||||||| Sbjct 2278 GAAGCAGATTTTATTAACTGTGTGATTTGGCGTAAACCTGCTGAAACAATGGCTAATTAT 2337 Query 27065 GCTAAAAAAGGCGCATTAATTGGAATCACTGGACGTATTCAGACTCGTAGCTATGAAAAT 27124 || || |||||| |||| | || | ||||| ||||| || || | | |||||| ||| Sbjct 2338 GCCAAGAAAGGCACATTGCTAGGTGTAACTGGTCGTATCCAAACGAGAAACTATGAGAAT 2397 Query 27125 CAACAGGGGCAACGAGTGTATGTGACAGAGGTAGTCGCTGAAAATTTTCAAATGCTAGAA 27184 ||||| || ||||| || |||||||| || | ||| || ||||| ||| || ||||| Sbjct 2398 CAACAAGGTCAACGTGTTTATGTGACTGAAATTGTCTGCGATAATTTCCAACTGTTAGAA 2457 Query 27185 AGTCGTGC 27192 |||||||| Sbjct 2458 AGTCGTGC 2465 >seq205685 Length=35797 Score = 116 bits (128), Expect = 8e-22 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 3545 AAATGGATGTCAAAGCATTTGAAAATAAAGCCAAAAAGTATGTTAAAGAAAAAGACTTTT 3604 |||||||||||||||||||||||| || || || |||||||| || ||||||||||| | Sbjct 18482 AAATGGATGTCAAAGCATTTGAAACAAAGGCTAAGAAGTATGTCAAGGAAAAAGACTTCT 18423 Query 3605 CGAACCAAGCAAATCAAGCGTTGAAACTTTATAACTTGACCATGAGAGTGAATCGTTTAG 3664 || ||||| |||| || |||||| |||||||| | | |||| | ||||||| |||| Sbjct 18422 CGCCTCAAGCGAATCGAGAATTGAAAATTTATAACCTTAAAATGAAACTGAATCGCTTAG 18363 Query 3665 AACT 3668 | || Sbjct 18362 AGCT 18359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104093332169894