Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_031094.1 Length=33105 Score E Sequences producing significant alignments: (Bits) Value seq111081 181 2e-41 seq205685 116 8e-22 >seq111081 Length=2465 Score = 181 bits (200), Expect = 2e-41 Identities = 189/248 (76%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 27440 GCAGTAGCATCTTTTAGCCTTGCGGTTAACCGTAACTTTAAGGATGCTAATGGTGAGCGT 27499 ||||| ||| | |||| ||| ||| | ||||||||||||| | |||| ||||| | ||| Sbjct 2218 GCAGTGGCAACCTTTACCCTAGCGTTAAACCGTAACTTTACGAATGCAAATGGAAATCGT 2277 Query 27500 GAAGCAGATTTTATCAATTGCGTTATCTGGCGCCAGCAAGCTGAAAATTTGGCTAATTGG 27559 |||||||||||||| || || || || ||||| | | ||||||| ||||||||| Sbjct 2278 GAAGCAGATTTTATTAACTGTGTGATTTGGCGTAAACCTGCTGAAACAATGGCTAATTAT 2337 Query 27560 GCTAAAAAAGGCGCATTGATTGGAATTACTGGACGTATTCAGACCCGTAGCTATGAAAAC 27619 || || |||||| ||||| | || | ||||| ||||| || || | | |||||| || Sbjct 2338 GCCAAGAAAGGCACATTGCTAGGTGTAACTGGTCGTATCCAAACGAGAAACTATGAGAAT 2397 Query 27620 CAACAAGGGCAACGAGTGTATGTGACAGAGGTAGTCGCTGAGAACTTCCAAATGCTAGAA 27679 |||||||| ||||| || |||||||| || | ||| || || |||||| || ||||| Sbjct 2398 CAACAAGGTCAACGTGTTTATGTGACTGAAATTGTCTGCGATAATTTCCAACTGTTAGAA 2457 Query 27680 AGTCGTGC 27687 |||||||| Sbjct 2458 AGTCGTGC 2465 >seq205685 Length=35797 Score = 116 bits (128), Expect = 8e-22 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 3521 AAATGGATGTCAAAGCATTTGAAAATAAAGCCAAAAAGTATGTTAAAGAAAAAGACTTTT 3580 |||||||||||||||||||||||| || || || |||||||| || ||||||||||| | Sbjct 18482 AAATGGATGTCAAAGCATTTGAAACAAAGGCTAAGAAGTATGTCAAGGAAAAAGACTTCT 18423 Query 3581 CGAACCAAGCAAATCAAGCGTTGAAACTTTATAACTTGACCATGAGAGTGAATCGTTTAG 3640 || ||||| |||| || |||||| |||||||| | | |||| | ||||||| |||| Sbjct 18422 CGCCTCAAGCGAATCGAGAATTGAAAATTTATAACCTTAAAATGAAACTGAATCGCTTAG 18363 Query 3641 AACT 3644 | || Sbjct 18362 AGCT 18359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105548870468918