Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_031915.1 Length=37395 Score E Sequences producing significant alignments: (Bits) Value seq111081 118 3e-22 seq205685 82.4 2e-11 >seq111081 Length=2465 Score = 118 bits (130), Expect = 3e-22 Identities = 176/247 (71%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 28885 ACGGCTTTCCAACAGTTGAAAATTACTGGCA-ACAACTTCTGTGACATAAACACGTTGAC 28943 ||| ||||| |||||||| |||||| | ||| |||| ||| || |||||||||||||||| Sbjct 2463 ACGACTTTCTAACAGTTGGAAATTA-TCGCAGACAATTTCAGTCACATAAACACGTTGAC 2405 Query 28944 CTTGCTGGTTATCATAGCTACGTGTTTGAATTACTCCTGTAACTCCGATAAGAGAGCCTT 29003 |||| || || |||||| | | ||||| || || || || || | | | ||||| Sbjct 2404 CTTGTTGATTCTCATAGTTTCTCGTTTGGATACGACCAGTTACACCTAGCAATGTGCCTT 2345 Query 29004 TTTTAGCCCAATTAACAAGATTTTCAGCTGACTGTCTCCAGATAACGCAATTGATAAAAT 29063 | || || ||||| | | ||||||| | | | ||| || || || || ||||||| Sbjct 2344 TCTTGGCATAATTAGCCATTGTTTCAGCAGGTTTACGCCAAATCACACAGTTAATAAAAT 2285 Query 29064 CAGCCTCACGCTCTCCAGCCTCGTTCTTAAATGGACGGTTTACAGCAAGAGTAAACGTAG 29123 | || ||||| | |||| | ||| |||| |||||||| || || ||||| || | Sbjct 2284 CTGCTTCACGATTTCCATTTGCATTCGTAAAGTTACGGTTTAACGCTAGGGTAAAGGTTG 2225 Query 29124 CAACCGC 29130 | || || Sbjct 2224 CCACTGC 2218 >seq205685 Length=35797 Score = 82.4 bits (90), Expect = 2e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 11350 TCAAGAGCCTTGATAGTATTAGCTACACCTTTAACAACCGCATTCTTTAAGTTCCCAAAA 11409 || || || |||||| ||||||||||||||| ||| ||||| | ||| |||| Sbjct 11350 TCGAGCGCTTTGATAACATTAGCTACACCTTTTGTAACAGCATTTCCCATGTTTTTAAAA 11409 Query 11410 GATGTCTGGATCCCTTTACTGTTAGTTTTAGCAAGTTCTGCAAAACCACCAACGCCACCA 11469 ||||| || ||||| ||||| | |||| || || ||||| || ||||| |||||| Sbjct 11410 GATGTTCCAATACCTTTTGAGTTAGCTCTAGCCAGCTCAGCAAATCCGCCAACACCACCA 11469 Query 11470 TTCAATTCAA 11479 ||||||| || Sbjct 11470 TTCAATTTAA 11479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119242421571578