Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_033829.1 Length=152388 Score E Sequences producing significant alignments: (Bits) Value seq210274 248 8e-61 >seq210274 Length=1834 Score = 248 bits (274), Expect = 8e-61 Identities = 327/447 (73%), Gaps = 6/447 (1%) Strand=Plus/Minus Query 17876 TTTAAATGTTGTGAGAAAAATTTTCAAGTTGAGACCGACAGTGAAGCATTCATTCCATAA 17935 ||| ||||||| ||||| |||| || || | ||| | || || |||| |||||| || Sbjct 455 TTTGAATGTTGATAGAAATATTTGTAAATTTAAACCTAAAGAAAAACATTGATTCCACAA 396 Query 17936 TTTATATTGCATTTTATTATAATTAGTCATCATGGTTGAGAGTGGCACTTGACAATCGAT 17995 | |||||| ||||||||||||||||| |||| | || | ||| |||||||| || | Sbjct 395 TCGATATTGTATTTTATTATAATTAGTTGTCATAGCAGATAATGGTACTTGACATTCTTT 336 Query 17996 GGCAAGTTCAATAATAAAATCAATTGATTTGGTTCGAGATTG-AAGTTTACTAACAAGAA 18054 || | | ||||||||||||||| |||| ||| || || ||| || || || Sbjct 335 AGCTAAATTTATAATAAAATCAATTAATTTTGTTTTTTCTTCCAATTTTGATACTAATAA 276 Query 18055 GTGTATCAGCATTATTATAATGCAAAGTATCACGAACTGATGGTAATTTATCATTGCTTT 18114 |||||||||||||||||||||||| || || | | |||||||||| || || Sbjct 275 -TGTATCAGCATTATTATAATGCAATGTTTCTCTTATAGATGGTAATTGTTCGGATGATT 217 Query 18115 CATCATGTATTAGAAATTTTTGTGTT-TTTAACATTTTGAAAAAG-GAATATCGTAGTGC 18172 ||| ||| | || |||| || | ||||| | || ||||| | ||||| || || Sbjct 216 CAT--TGTGCGAAAACATTTTTTGATGTTTAATAATTGAAAAAAATGTATATCTTAAAGC 159 Query 18173 TACTGCACTGACACCAGTTTTTGAATCTTTCATGATATTTCGACTTACTTCGTTCAAAGT 18232 | |||| | ||||||||||| |||||||| | |||||| | |||||| || || || Sbjct 158 GATTGCATTAACACCAGTTTTAGAATCTTTTAATATATTTTTAGATACTTCATTTAATGT 99 Query 18233 GTAGCTTTTGAAACGATATCTCATCACAATAATGCGAAATAAATCCAAATGTATTTGTTC 18292 ||| ||||| |||||||||||||| | |||||| ||||||| ||| ||||||||||| | Sbjct 98 GTAACTTTTAAAACGATATCTCATTATAATAATACGAAATATATCTAAATGTATTTGATT 39 Query 18293 GATTCCATAACTATAACCTTCTCGCCA 18319 ||| ||| ||| ||||| ||||| Sbjct 38 TGCACCAAAACAATATCCTTCACGCCA 12 Score = 150 bits (166), Expect = 2e-31 Identities = 290/428 (68%), Gaps = 0/428 (0%) Strand=Plus/Minus Query 17259 TCTAAAATCTTTCGCATAATTTTGGTATGTGCACGTGTTTCGTTAAATTTTGCTACAATA 17318 ||||| || || ||| | ||||| || | ||| || || | |||||||| || ||| Sbjct 1032 TCTAATATTTTACGCTTCATTTTTGTTTCTGCTCGAGTATTATTAAATTTAATTATTATA 973 Query 17319 TCAGATAATACACCACGTCGACCTTCCCATATTATGATGACTGGCGAATCTTGGCGTTTG 17378 || || |||| ||| | | || ||||||||||| || ||| |||| | | ||| Sbjct 972 TCTGACAATATACCTCTTTTTCCCTCCCATATTATAATAACTAATGAATTGTTTCTTTTT 913 Query 17379 TGAAGTTCTTCAAGTGTGAATGGAAACTCTGCTCCGCAATATAATCCATCGTAAATATAT 17438 | |||||| | | ||| ||| ||| | || |||||||| | || | |||| Sbjct 912 AATAATTCTTCCAAATTAAATTCAAATTCTCCACCACAATATAAATTGTTATATAGATAT 853 Query 17439 TGATAATATAAAATTATAGTCTCTGTTGCCGTTGAACCATTATGTGCCAAATAATCATAT 17498 ||| || |||| || | || |||| | ||| ||| |||||| ||||||||||| Sbjct 852 TGAAAAAATAATATATTGGTTTCTGATTTTGTTTCGCCAGTATGTGTTAAATAATCATAA 793 Query 17499 GTTTTATATTCATGATTATTTTGAATTGTATTATACAACATTTGTAATATGCTTGCTGGT 17558 |||| ||||| | ||| |||| ||||||| | |||| |||||||| Sbjct 792 CATTTAAATTCACAAGGGTTTAAAATTTTATTATAAATTCCGGCCAATACATTTGCTGGT 733 Query 17559 AAAATTGTAAGTGTCTCGTCAGATATATTCTTGCGATCCATAAGTAATGGGTATGCGGTA 17618 |||||||| | || || ||||||||||| || ||| || | || ||| || || || Sbjct 732 AAAATTGTTAACGTTTCATCAGATATATTTTTTTTATCAATTAATATTGGATACGCTGTT 673 Query 17619 ACATAGTCATACATTTGCACATTGTTGGCATCAATCTCCCCTAAACAAAAGTTCGCACCG 17678 | ||| ||||| ||||| |||| | |||| || |||||||| || || ||||| Sbjct 672 ATATAATCATATATTTGAACATCATCAACATCGTATTCACCTAAACAGAAATTTGCACCA 613 Query 17679 CCTGGAAA 17686 || ||||| Sbjct 612 CCAGGAAA 605 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 16290 ATCATGATAGAATCTGTGTCCAAATACAATACTTTATAATTTAAACTTTGACAATATTGA 16349 ||||| |||||||| || || | ||| ||| | || | |||| | |||||| Sbjct 1710 ATCATTATAGAATCAGTATCAATATAATATATATCATGACCTAAAGATCTTATATATTGT 1651 Query 16350 GCTGATGCAAGTAATGCGTTCCGAGTCATACAGGTTATGCCTGCGGCTACAACATGTATC 16409 |||| | | ||||| ||| || || ||||| ||||| |||| ||||||| ||||| Sbjct 1650 GCTGTAGATAATAATGTGTTACGTGTAATACATGTTATTGCTGCTGCTACAATTGGTATC 1591 Query 16410 ATTTTACCCACGCATCCATATATACTAGAGACCAACGATTTTTGCAAATCGTACGAATTA 16469 ||||| || | || ||||||||||| || | || |||||||| |||| || |||||| Sbjct 1590 ATTTTTCCAAGACACCCATATATACTTGATATTAATGATTTTTGTAAATTATATGAATTA 1531 Query 16470 CT 16471 || Sbjct 1530 CT 1529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 486225851107360