Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq30 104 2e-17 >seq30 Length=3281913 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 16475 TACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAAT 16534 || || ||||| || | | |||||| ||||| || ||||| |||||||| || || || Sbjct 991343 TAAGTGTCAATGAGAATAGAGTACATCTCTGAATGGATGTTTTCTATGGCAATTTGGAAA 991284 Query 16535 CCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTC 16594 ||||||||||| |||||||| | | ||||||||| || | |||| | | ||| Sbjct 991283 CCATAGAAGCAACGAGCCTCTGTAACTTGTACTTCTTGACTGAACCTTTCCACTAAATTC 991224 Query 16595 TCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTT 16654 ||||| || || || || ||||| ||||| ||||||| |||| ||||| | ||| Sbjct 991223 TCATTGACAATGCCATCTGAGGCAGCGAAAAATGCCAATACGTGCGAGATGAAGTGTTTC 991164 Query 16655 TCGTC 16659 || || Sbjct 991163 TCATC 991159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511379591857400