Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq51 134 1e-26 >seq51 Length=2226466 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCA 102103 || || ||||| | ||||||||| ||||| ||||| || | ||||||||| ||||||| | Sbjct 126853 GCGCCAAAATGTCGCCACTGAAAGCCATATACAGGACCTAAATCTCCTTCTTCTCTGTTA 126794 Query 102104 TAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCA 102163 | ||||| || || ||||||| | || ||||| ||||||||||||| ||||| Sbjct 126793 GTTAGGCCAAGATTGTCCAAAAATGCACGTGAACCATTGGCATCCCAAATGTTGACGCCT 126734 Query 102164 GCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACA 102223 |||||| ||||||| | || || ||||| |||||||| | ||| || ||||| Sbjct 126733 TTCTCTGATAACTCTTTGGCATTTGTTGAGCCTCTAATAAACCAGAGCAGCTCCTCAACT 126674 Query 102224 ACACCTCTCCAAAATAC 102240 || |||||||| || || Sbjct 126673 ACTCCTCTCCAGAAGAC 126657 Score = 87.8 bits (96), Expect = 1e-12 Identities = 162/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 101747 AGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGC 101806 ||||| || ||||| |||||||| | || | || || || |||||||| ||||| Sbjct 127391 AGATTCGTTACATGTGCAATCATACGCGTCAGCAGCGAGTAAGAGGCAATGTTGAATGGT 127332 Query 101807 ACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAG 101866 || || | ||||||||||| |||||| || ||||| || || | ||||||| Sbjct 127331 ACACCAAGTCCCATATCAGCACTTCTTTGGTAAAGTTGGCAAGACAATTTTCCATTTGCT 127272 Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926 |||||||| ||| | | || ||||| || | |||||| || |||||| Sbjct 127271 ACATAAAACTGAACAAGAGCGTGGCAAGGTGGAAGAGCCATTTGAGAAATGTCACTTGGG 127212 Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCA 101984 ||||| || | ||||| |||||||| || || || ||||||| | | ||||| Sbjct 127211 TTCCACGCGCTCATTATTATCCTTCTGTCATCTGGATTATTTTTTATCTTTTTAATCA 127154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361227227031695