Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq26 93.3 4e-14 seq4393 84.2 2e-11 >seq26 Length=4002310 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| || | ||||||||||| || |||||||||||| || ||| | | Sbjct 1458180 AATGCAAATTTTTGTTAAAACATTGACTGGTAAAACCATTACCTTGGAGGTCGAAGCTTC 1458121 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 ||| || | | || | ||| ||||| ||||| |||||| | ||| || || Sbjct 1458120 AGATACCATCGAGAATGTCAAGGCTAAAATCCAAGATAAGGAAGGTATTCCCCCTGACCA 1458061 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || | || |||||||| || |||||||| |||||| | ||| || | || ||||| Sbjct 1458060 GCAGCGTCTCATCTTTGCTGGAAAACAACTCGAAGATGGTAGAACCTTGTCAGACTACAA 1458001 Query 29141 TATTCAGAAGGAATCTACTCTTCA 29164 ||| ||||| ||||| || || || Sbjct 1458000 TATCCAGAAAGAATCCACACTACA 1457977 >seq4393 Length=1805 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||||||||| | || ||| |||||| |||| || ||||| ||||| || || ||| Sbjct 137 GATAAAGAAGGAATTCCTCCAGACCAACAACGACTGATTTTTGCTGGCAAGCAGCTCGAA 78 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | || || |||| || || ||||||||||| || || ||||| |||| || Sbjct 77 GATGGCCGTACACTGTCCGACTATAACATTCAGAAGGAGTCCACCCTTCATTTGGTCTTG 18 Query 29175 CGATTACGAGGAGG 29188 || | |||||||| Sbjct 17 CGTCTCCGAGGAGG 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428307575221475