Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq51 127 2e-24 >seq51 Length=2226466 Score = 127 bits (140), Expect = 2e-24 Identities = 187/262 (71%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 146008 CCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCCCGAAGTGCCTCCACTG 146066 ||||| || |||||| | | || | ||||||||| ||| || |||| | |||||| Sbjct 309741 CCCTGGCCGGTGTAATCCG-CGTGCATGTCCACGTATTTGGCGCCAAAGTATCGCCACTG 309683 Query 146067 GAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAG 146126 ||| ||||| ||||| || || || || ||| ||| | | ||| | | || Sbjct 309682 GAAGCCGTACACGGGGCCAAGATCTCCTTCCTCTCTGCCCGTGAAGCCGCAGATGTCCAG 309623 Query 146127 GAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGA 146186 ||| |||||||| |||||||||||||||| || | || | ||||| || || |||| Sbjct 309622 GAATTCCCGGGATGCGTTGGCGTCCCAGATTTTAATACCTTTGGCGGACAGTTCTTTGGC 309563 Query 146187 GTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCT 146246 || || || || ||||||||||||| |||||| ||| || || | ||| ||||| | Sbjct 309562 GTTGGTCGAGCCTCTGATGAACCAGAACAGCTCCTCGGCCACTCCGCGCCAAAAGACGCG 309503 Query 146247 CTTGGTGGTCAGCAGGGGGAAC 146268 ||| || ||||| ||||| ||| Sbjct 309502 CTTCGTCGTCAGTAGGGGAAAC 309481 Score = 122 bits (134), Expect = 1e-22 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 145777 GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGC 145836 |||||||||||||| ||| ||||| || || || || || |||||||| || | | | Sbjct 310100 GTCAGCAGGGAGTAAGAGGCGATGTTAAACGGTACGCCGAGGCCCATGTCACCGGCTCTC 310041 Query 145837 TGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAG 145896 |||||||| || || |||| ||| || || |||||||||||||| || ||||||| Sbjct 310040 TGGTACAGGTGACACGAGACCTCGCCACCGTCCACGTAGAACTGGGCGAGCGAGTGGCAG 309981 Query 145897 GGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTG 145956 || ||||| ||||| ||| | || |||||||||| | | ||| || | |||||| Sbjct 309980 GGAGGCAGAGCCATCAGGGGAATATCAACCGGGTTCCACGAGCTGATGATTATTCTCCTG 309921 Query 145957 CTCTCGGGGTTCCTCTTGATCT 145978 | ||||||| || | |||| Sbjct 309920 TCGTTGGGGTTCGTCCTTATCT 309899 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 146134 CGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTG 146193 || || || ||||| ||||| || |||||||| || | || | ||| |||| | || Sbjct 126766 CGTGAACCATTGGCATCCCAAATGTTGACGCCTTTCTCTGATAACTCTTTGGCATTTGTT 126707 Query 146194 GACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTG 146253 || || || || |||||||||||||| || | || || ||||||||||| | || || Sbjct 126706 GAGCCTCTAATAAACCAGAGCAGCTCCTCAACTACTCCTCTCCAGAAGACGCGTTTTGTT 126647 Query 146254 GTCAGCAGGGGGAA 146267 ||||| || ||||| Sbjct 126646 GTCAGTAGCGGGAA 126633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590036637897800